Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 LETM1P2-201ENST00000597330 2178 ntBASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 AC112492.5-201ENST00000421897 457 ntBASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 AC068587.9-201ENST00000641814 219 ntBASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 AC093484.2-201ENST00000580996 2166 ntBASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTNAP3Q9BZ76 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 MRPS18AP1-201ENST00000414458 589 ntBASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 SPDYE11-202ENST00000450699 704 ntBASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 AC069120.2-201ENST00000524091 540 ntBASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 SPDYE9P-201ENST00000570642 692 ntBASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 OR7E47P-204ENST00000575924 449 ntBASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 SPDYE10P-202ENST00000612005 668 ntBASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 SPDYE8P-202ENST00000612377 668 ntBASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 IGHV3-72-202ENST00000621503 303 ntBASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 AC008677.1-201ENST00000519230 1561 ntBASIC16.6■□□□□ 0.25
CNTNAP3Q9BZ76 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms