Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CAPN3-208ENST00000397204 1237 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 NPM1P46-201ENST00000399556 865 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 IL6-202ENST00000401630 765 ntTSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 LBH-205ENST00000407930 756 ntTSL 2 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AC241520.1-201ENST00000422654 1099 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 OR7E109P-201ENST00000445529 855 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC02105-201ENST00000504552 1003 ntTSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AC022690.1-201ENST00000526681 550 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 MIR3611-201ENST00000584484 83 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AL031429.2-201ENST00000602605 649 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 DUXAP11-201ENST00000603858 526 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AC069545.1-201ENST00000605671 358 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AC004948.1-201ENST00000609858 672 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AC040896.1-201ENST00000613819 479 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 U85056.1-201ENST00000616429 682 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 ARHGAP44-212ENST00000616670 884 ntTSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AC008121.3-201ENST00000618726 433 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 AC129492.7-201ENST00000622992 756 ntBASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 SPATA4-203ENST00000515234 2115 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 Y_RNA.553-201ENST00000384670 102 ntBASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 U3.28-201ENST00000391249 210 ntBASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 CAV1-204ENST00000393470 598 ntTSL 4 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 MPV17-209ENST00000405983 859 ntTSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 AL121882.1-201ENST00000422893 417 ntBASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 VN1R10P-201ENST00000447106 875 ntBASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 COMMD9-203ENST00000452374 917 ntTSL 2 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 AC092620.1-201ENST00000453636 680 ntTSL 3 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC01300-202ENST00000521073 796 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 HNRNPA1P72-201ENST00000529511 967 ntBASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 AC126471.1-201ENST00000550676 362 ntBASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 AC079171.1-201ENST00000568788 914 ntBASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 GAK-223ENST00000628912 497 ntTSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms