Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.31■□□□□ 0.84
SLF1Q9BQI6 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 IGHV3-52-201ENST00000519770 353 ntBASIC20.31■□□□□ 0.84
SLF1Q9BQI6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 STK25P1-201ENST00000585406 838 ntBASIC20.31■□□□□ 0.84
SLF1Q9BQI6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLF1Q9BQI6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 NCF1C-201ENST00000438382 1427 ntBASIC20.3■□□□□ 0.84
SLF1Q9BQI6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 AC007967.2-201ENST00000432613 625 ntBASIC20.3■□□□□ 0.84
SLF1Q9BQI6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.3■□□□□ 0.84
SLF1Q9BQI6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 ELK2BP-201ENST00000415014 1224 ntBASIC20.29■□□□□ 0.84
SLF1Q9BQI6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms