Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VRK1Q99986 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
VRK1Q99986 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.5■□□□□ 0.07
VRK1Q99986 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.5■□□□□ 0.07
VRK1Q99986 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VRK1Q99986 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.5■□□□□ 0.07
VRK1Q99986 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 AC026396.1-201ENST00000419388 421 ntBASIC15.5■□□□□ 0.07
VRK1Q99986 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
VRK1Q99986 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.5■□□□□ 0.07
VRK1Q99986 AC138894.3-201ENST00000603787 634 ntBASIC15.5■□□□□ 0.07
VRK1Q99986 AL121772.3-201ENST00000610840 674 ntBASIC15.5■□□□□ 0.07
VRK1Q99986 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.5■□□□□ 0.07
VRK1Q99986 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.5■□□□□ 0.07
VRK1Q99986 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VRK1Q99986 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
VRK1Q99986 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VRK1Q99986 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
VRK1Q99986 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.5■□□□□ 0.07
VRK1Q99986 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
VRK1Q99986 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK1Q99986 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 AC233702.3-201ENST00000578656 1387 ntBASIC15.49■□□□□ 0.07
VRK1Q99986 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.49■□□□□ 0.07
VRK1Q99986 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK1Q99986 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
VRK1Q99986 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
VRK1Q99986 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
VRK1Q99986 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
VRK1Q99986 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK1Q99986 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VRK1Q99986 AC018695.7-201ENST00000624587 2492 ntBASIC15.49■□□□□ 0.07
VRK1Q99986 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK1Q99986 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.49■□□□□ 0.07
VRK1Q99986 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK1Q99986 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.49■□□□□ 0.07
VRK1Q99986 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VRK1Q99986 AC004870.1-201ENST00000315132 882 ntBASIC15.49■□□□□ 0.07
VRK1Q99986 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.49■□□□□ 0.07
VRK1Q99986 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK1Q99986 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
VRK1Q99986 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK1Q99986 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK1Q99986 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.49■□□□□ 0.07
VRK1Q99986 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK1Q99986 AC091304.2-201ENST00000564639 760 ntBASIC15.49■□□□□ 0.07
VRK1Q99986 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK1Q99986 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK1Q99986 RN7SL510P-201ENST00000581311 263 ntBASIC15.49■□□□□ 0.07
VRK1Q99986 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.49■□□□□ 0.07
VRK1Q99986 AC099336.1-202ENST00000602961 463 ntBASIC15.49■□□□□ 0.07
VRK1Q99986 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.49■□□□□ 0.07
VRK1Q99986 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.49■□□□□ 0.07
VRK1Q99986 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.49■□□□□ 0.07
VRK1Q99986 AC138028.4-201ENST00000564984 1845 ntBASIC15.49■□□□□ 0.07
VRK1Q99986 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK1Q99986 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
VRK1Q99986 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK1Q99986 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VRK1Q99986 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VRK1Q99986 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.48■□□□□ 0.07
VRK1Q99986 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VRK1Q99986 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
VRK1Q99986 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VRK1Q99986 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms