Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 KRT8P50-201ENST00000562022 1438 ntBASIC16.49■□□□□ 0.23
NR1H4Q96RI1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 AL109659.2-201ENST00000606809 1674 ntBASIC16.49■□□□□ 0.23
NR1H4Q96RI1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 AC079328.2-201ENST00000561241 3354 ntBASIC16.48■□□□□ 0.23
NR1H4Q96RI1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.48■□□□□ 0.23
NR1H4Q96RI1 NCF1B-203ENST00000435988 1254 ntBASIC16.48■□□□□ 0.23
NR1H4Q96RI1 TSPY6P-201ENST00000448518 926 ntBASIC16.48■□□□□ 0.23
NR1H4Q96RI1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.48■□□□□ 0.23
NR1H4Q96RI1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 HLA-A-209ENST00000638375 975 ntBASIC16.48■□□□□ 0.23
NR1H4Q96RI1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.48■□□□□ 0.23
NR1H4Q96RI1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 AC046185.3-201ENST00000623228 1824 ntBASIC16.47■□□□□ 0.23
NR1H4Q96RI1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 REXO1L11P-201ENST00000620964 1927 ntBASIC16.47■□□□□ 0.23
NR1H4Q96RI1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 AC009102.3-201ENST00000623118 1491 ntBASIC16.47■□□□□ 0.23
NR1H4Q96RI1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NR1H4Q96RI1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms