Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 RN7SL589P-201ENST00000481268 310 ntBASIC18.02■□□□□ 0.48
NECTIN4Q96NY8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.02■□□□□ 0.48
NECTIN4Q96NY8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.02■□□□□ 0.48
NECTIN4Q96NY8 AL390955.2-201ENST00000603032 514 ntBASIC18.02■□□□□ 0.48
NECTIN4Q96NY8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.02■□□□□ 0.48
NECTIN4Q96NY8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
NECTIN4Q96NY8 AL035252.4-201ENST00000624174 288 ntBASIC18.02■□□□□ 0.48
NECTIN4Q96NY8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.02■□□□□ 0.48
NECTIN4Q96NY8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NECTIN4Q96NY8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NECTIN4Q96NY8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NECTIN4Q96NY8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NECTIN4Q96NY8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NECTIN4Q96NY8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NECTIN4Q96NY8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.02■□□□□ 0.47
NECTIN4Q96NY8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 AC129492.6-201ENST00000611383 1305 ntBASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 AC005034.1-201ENST00000426657 489 ntBASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 AL512356.2-201ENST00000546955 174 ntBASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 DUX4L27-201ENST00000554796 1261 ntBASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 AC087641.1-201ENST00000557561 1021 ntBASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN4Q96NY8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NECTIN4Q96NY8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
NECTIN4Q96NY8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18■□□□□ 0.47
NECTIN4Q96NY8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18■□□□□ 0.47
NECTIN4Q96NY8 AL031598.1-201ENST00000561511 1773 ntBASIC18■□□□□ 0.47
NECTIN4Q96NY8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18■□□□□ 0.47
NECTIN4Q96NY8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18■□□□□ 0.47
NECTIN4Q96NY8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18■□□□□ 0.47
NECTIN4Q96NY8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 AC069335.1-201ENST00000489972 472 ntBASIC18■□□□□ 0.47
NECTIN4Q96NY8 TERF1P3-201ENST00000505638 1227 ntBASIC18■□□□□ 0.47
NECTIN4Q96NY8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18■□□□□ 0.47
NECTIN4Q96NY8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18■□□□□ 0.47
NECTIN4Q96NY8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 AL645728.2-201ENST00000641974 660 ntBASIC18■□□□□ 0.47
NECTIN4Q96NY8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18■□□□□ 0.47
NECTIN4Q96NY8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN4Q96NY8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 AC015922.1-201ENST00000421102 1152 ntBASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 AC055876.3-201ENST00000431496 288 ntBASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 AC051619.7-201ENST00000568314 623 ntBASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 AC138649.4-201ENST00000612222 287 ntBASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 AC009949.1-201ENST00000623048 1830 ntBASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms