Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 AC009947.1-201ENST00000444350 727 ntBASIC14.23□□□□□ -0.13
ZNF48Q96MX3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.23□□□□□ -0.13
ZNF48Q96MX3 DUTP2-201ENST00000519164 463 ntBASIC14.23□□□□□ -0.13
ZNF48Q96MX3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 AL139424.1-201ENST00000607572 797 ntBASIC14.23□□□□□ -0.13
ZNF48Q96MX3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 AC073592.5-201ENST00000624854 528 ntBASIC14.23□□□□□ -0.13
ZNF48Q96MX3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF48Q96MX3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 SIRPAP1-201ENST00000448467 1770 ntBASIC14.22□□□□□ -0.13
ZNF48Q96MX3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 COX5BP2-201ENST00000392354 334 ntBASIC14.22□□□□□ -0.13
ZNF48Q96MX3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 SPDYE21P-201ENST00000413323 827 ntBASIC14.22□□□□□ -0.13
ZNF48Q96MX3 KRT18P27-201ENST00000427733 1299 ntBASIC14.22□□□□□ -0.13
ZNF48Q96MX3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 AC010327.4-202ENST00000591484 748 ntBASIC14.22□□□□□ -0.13
ZNF48Q96MX3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 SIGLEC16-201ENST00000599858 1437 ntBASIC14.22□□□□□ -0.13
ZNF48Q96MX3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF48Q96MX3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms