Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FGD4Q96M96 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.73■□□□□ 0.75
FGD4Q96M96 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FGD4Q96M96 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FGD4Q96M96 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FGD4Q96M96 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.73■□□□□ 0.75
FGD4Q96M96 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.73■□□□□ 0.75
FGD4Q96M96 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
FGD4Q96M96 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.73■□□□□ 0.75
FGD4Q96M96 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FGD4Q96M96 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.73■□□□□ 0.75
FGD4Q96M96 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.73■□□□□ 0.75
FGD4Q96M96 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FGD4Q96M96 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FGD4Q96M96 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
FGD4Q96M96 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FGD4Q96M96 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FGD4Q96M96 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FGD4Q96M96 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
FGD4Q96M96 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 FLJ13224-201ENST00000313737 1514 ntBASIC19.72■□□□□ 0.75
FGD4Q96M96 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 AC090164.3-201ENST00000610780 2143 ntBASIC19.72■□□□□ 0.75
FGD4Q96M96 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
FGD4Q96M96 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.72■□□□□ 0.75
FGD4Q96M96 AC254562.1-201ENST00000417586 456 ntBASIC19.72■□□□□ 0.75
FGD4Q96M96 ACTG1P4-201ENST00000425123 1122 ntBASIC19.72■□□□□ 0.75
FGD4Q96M96 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.72■□□□□ 0.75
FGD4Q96M96 METTL21AP1-201ENST00000438852 635 ntBASIC19.72■□□□□ 0.75
FGD4Q96M96 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.72■□□□□ 0.75
FGD4Q96M96 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.72■□□□□ 0.75
FGD4Q96M96 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
FGD4Q96M96 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.72■□□□□ 0.75
FGD4Q96M96 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
FGD4Q96M96 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.72■□□□□ 0.75
FGD4Q96M96 AC004408.2-201ENST00000623613 2777 ntBASIC19.72■□□□□ 0.75
FGD4Q96M96 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.72■□□□□ 0.75
FGD4Q96M96 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.72■□□□□ 0.75
FGD4Q96M96 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.72■□□□□ 0.75
FGD4Q96M96 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 BCAR1-209ENST00000546196 1340 ntBASIC19.72■□□□□ 0.75
FGD4Q96M96 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.72■□□□□ 0.75
FGD4Q96M96 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FGD4Q96M96 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
FGD4Q96M96 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FGD4Q96M96 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FGD4Q96M96 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.71■□□□□ 0.75
FGD4Q96M96 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.71■□□□□ 0.75
FGD4Q96M96 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.71■□□□□ 0.75
FGD4Q96M96 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FGD4Q96M96 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FGD4Q96M96 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FGD4Q96M96 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
FGD4Q96M96 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FGD4Q96M96 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.71■□□□□ 0.75
FGD4Q96M96 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.71■□□□□ 0.75
FGD4Q96M96 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.71■□□□□ 0.75
FGD4Q96M96 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
FGD4Q96M96 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FGD4Q96M96 MYCLP1-201ENST00000372451 1075 ntBASIC19.71■□□□□ 0.75
FGD4Q96M96 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.71■□□□□ 0.75
FGD4Q96M96 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FGD4Q96M96 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.71■□□□□ 0.75
FGD4Q96M96 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.71■□□□□ 0.75
FGD4Q96M96 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
FGD4Q96M96 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.71■□□□□ 0.75
FGD4Q96M96 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.71■□□□□ 0.75
FGD4Q96M96 GGTLC5P-201ENST00000617623 998 ntBASIC19.71■□□□□ 0.75
FGD4Q96M96 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
FGD4Q96M96 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FGD4Q96M96 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FGD4Q96M96 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FGD4Q96M96 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.71■□□□□ 0.75
FGD4Q96M96 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FGD4Q96M96 AC009113.1-201ENST00000570267 2443 ntBASIC19.71■□□□□ 0.75
FGD4Q96M96 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FGD4Q96M96 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
FGD4Q96M96 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
FGD4Q96M96 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FGD4Q96M96 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FGD4Q96M96 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FGD4Q96M96 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FGD4Q96M96 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.7■□□□□ 0.74
FGD4Q96M96 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.7■□□□□ 0.74
FGD4Q96M96 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.7■□□□□ 0.74
FGD4Q96M96 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.7■□□□□ 0.74
FGD4Q96M96 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FGD4Q96M96 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FGD4Q96M96 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms