Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 TSPY12P-201ENST00000421279 868 ntBASIC15.25■□□□□ 0.03
CPNE2Q96FN4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 ATP5G1P1-201ENST00000448724 379 ntBASIC15.25■□□□□ 0.03
CPNE2Q96FN4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 AL136038.4-201ENST00000603606 1261 ntBASIC15.25■□□□□ 0.03
CPNE2Q96FN4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 KRT8P9-201ENST00000558927 1449 ntBASIC15.25■□□□□ 0.03
CPNE2Q96FN4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 AL391005.1-201ENST00000623953 2435 ntBASIC15.24■□□□□ 0.03
CPNE2Q96FN4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.24■□□□□ 0.03
CPNE2Q96FN4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 RASA4DP-201ENST00000460726 1199 ntBASIC15.24■□□□□ 0.03
CPNE2Q96FN4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 AC016396.2-201ENST00000562575 1417 ntBASIC15.24■□□□□ 0.03
CPNE2Q96FN4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE2Q96FN4 AC108860.2-201ENST00000562760 2183 ntBASIC15.24■□□□□ 0.03
CPNE2Q96FN4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms