Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 ACTG1P4-201ENST00000425123 1122 ntBASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 AC008608.2-201ENST00000606089 416 ntBASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 AC004817.3-201ENST00000602957 2129 ntBASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 AP001094.4-201ENST00000579008 2176 ntBASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 AL022326.1-202ENST00000641533 845 ntBASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.17■□□□□ 0.18
CTHRC1Q96CG8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms