Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 AL445228.2-201ENST00000605589 952 ntBASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 AL353593.2-201ENST00000602529 1483 ntBASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 TP73-AS1-210ENST00000637775 1455 ntBASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDF1Q96CC6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 IGHV3-47-201ENST00000425060 335 ntBASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 LINC00265-3P-201ENST00000447588 903 ntBASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 AC111152.3-201ENST00000569699 673 ntBASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 AC069148.1-201ENST00000608741 768 ntBASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 NPAP1P7-201ENST00000613027 823 ntBASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDF1Q96CC6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 NSUN5P1-202ENST00000421140 1535 ntBASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 NSUN5P2-203ENST00000457352 1529 ntBASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 ARMC10P1-201ENST00000313754 855 ntBASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 STK25P1-201ENST00000585406 838 ntBASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 BNIP3P18-201ENST00000593976 575 ntBASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 AC091076.1-201ENST00000610741 619 ntBASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 AC010331.1-201ENST00000611423 582 ntBASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDF1Q96CC6 AC046185.3-201ENST00000623228 1824 ntBASIC17.02■□□□□ 0.31
RHBDF1Q96CC6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RHBDF1Q96CC6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RHBDF1Q96CC6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RHBDF1Q96CC6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.02■□□□□ 0.31
RHBDF1Q96CC6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RHBDF1Q96CC6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
RHBDF1Q96CC6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RHBDF1Q96CC6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RHBDF1Q96CC6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
RHBDF1Q96CC6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.01■□□□□ 0.31
RHBDF1Q96CC6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.01■□□□□ 0.31
RHBDF1Q96CC6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.01■□□□□ 0.31
RHBDF1Q96CC6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDF1Q96CC6 AC022211.2-201ENST00000585075 2527 ntBASIC17.01■□□□□ 0.31
RHBDF1Q96CC6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDF1Q96CC6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDF1Q96CC6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms