Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 TSPY5P-201ENST00000426936 936 ntBASIC19.74■□□□□ 0.75
SMARCE1Q969G3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 HOMER2P1-201ENST00000455653 964 ntBASIC19.74■□□□□ 0.75
SMARCE1Q969G3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 AC018695.7-201ENST00000624587 2492 ntBASIC19.74■□□□□ 0.75
SMARCE1Q969G3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SMARCE1Q969G3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 NKILA-202ENST00000614771 2598 ntBASIC19.73■□□□□ 0.75
SMARCE1Q969G3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 RNF152P1-201ENST00000397754 604 ntBASIC19.73■□□□□ 0.75
SMARCE1Q969G3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 AC005332.3-201ENST00000589904 676 ntBASIC19.73■□□□□ 0.75
SMARCE1Q969G3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 LINC01311-201ENST00000565162 1445 ntBASIC19.73■□□□□ 0.75
SMARCE1Q969G3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCE1Q969G3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 AC096633.1-201ENST00000422446 749 ntBASIC19.72■□□□□ 0.75
SMARCE1Q969G3 KRT18P57-201ENST00000443599 1254 ntBASIC19.72■□□□□ 0.75
SMARCE1Q969G3 AC112907.2-201ENST00000448639 330 ntBASIC19.72■□□□□ 0.75
SMARCE1Q969G3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 VENTXP5-201ENST00000523979 775 ntBASIC19.72■□□□□ 0.75
SMARCE1Q969G3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SMARCE1Q969G3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCE1Q969G3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms