Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC008894.3-201ENST00000624324 3103 ntBASIC19.86■□□□□ 0.77
ERCC4Q92889 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.86■□□□□ 0.77
ERCC4Q92889 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 TSPY12P-201ENST00000421279 868 ntBASIC19.86■□□□□ 0.77
ERCC4Q92889 LIN28AP1-201ENST00000429574 405 ntBASIC19.86■□□□□ 0.77
ERCC4Q92889 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.86■□□□□ 0.77
ERCC4Q92889 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.86■□□□□ 0.77
ERCC4Q92889 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
ERCC4Q92889 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ERCC4Q92889 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.86■□□□□ 0.77
ERCC4Q92889 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.86■□□□□ 0.77
ERCC4Q92889 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.86■□□□□ 0.77
ERCC4Q92889 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.86■□□□□ 0.77
ERCC4Q92889 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC4Q92889 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.85■□□□□ 0.77
ERCC4Q92889 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ERCC4Q92889 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC4Q92889 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC4Q92889 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.85■□□□□ 0.77
ERCC4Q92889 AC117947.1-201ENST00000427448 529 ntBASIC19.85■□□□□ 0.77
ERCC4Q92889 ATP5G1P1-201ENST00000448724 379 ntBASIC19.85■□□□□ 0.77
ERCC4Q92889 YBX1P2-201ENST00000489612 999 ntBASIC19.85■□□□□ 0.77
ERCC4Q92889 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC4Q92889 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC4Q92889 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.85■□□□□ 0.77
ERCC4Q92889 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.85■□□□□ 0.77
ERCC4Q92889 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
ERCC4Q92889 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
ERCC4Q92889 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.85■□□□□ 0.77
ERCC4Q92889 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.85■□□□□ 0.77
ERCC4Q92889 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ERCC4Q92889 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC4Q92889 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
ERCC4Q92889 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.84■□□□□ 0.77
ERCC4Q92889 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ERCC4Q92889 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
ERCC4Q92889 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC4Q92889 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC4Q92889 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.84■□□□□ 0.77
ERCC4Q92889 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC4Q92889 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC4Q92889 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.84■□□□□ 0.77
ERCC4Q92889 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC4Q92889 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.84■□□□□ 0.77
ERCC4Q92889 TERF1P1-201ENST00000311003 1181 ntBASIC19.84■□□□□ 0.77
ERCC4Q92889 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ERCC4Q92889 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ERCC4Q92889 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.84■□□□□ 0.77
ERCC4Q92889 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.84■□□□□ 0.77
ERCC4Q92889 AC009154.2-201ENST00000621177 724 ntBASIC19.84■□□□□ 0.77
ERCC4Q92889 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC4Q92889 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC4Q92889 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ERCC4Q92889 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC4Q92889 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC4Q92889 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC4Q92889 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC4Q92889 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
ERCC4Q92889 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
ERCC4Q92889 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
ERCC4Q92889 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC4Q92889 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC4Q92889 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC4Q92889 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC4Q92889 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC4Q92889 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC4Q92889 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
ERCC4Q92889 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.83■□□□□ 0.77
ERCC4Q92889 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC4Q92889 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC4Q92889 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms