Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNED1Q8TER0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNED1Q8TER0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNED1Q8TER0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 KRT18P32-201ENST00000424695 1287 ntBASIC21.09■□□□□ 0.97
SNED1Q8TER0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 RNA5SP421-201ENST00000516864 134 ntBASIC21.09■□□□□ 0.97
SNED1Q8TER0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 AC084121.4-201ENST00000641598 221 ntBASIC21.09■□□□□ 0.97
SNED1Q8TER0 AF228730.8-201ENST00000642140 221 ntBASIC21.09■□□□□ 0.97
SNED1Q8TER0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNED1Q8TER0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNED1Q8TER0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNED1Q8TER0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNED1Q8TER0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SNED1Q8TER0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
SNED1Q8TER0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNED1Q8TER0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNED1Q8TER0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.08■□□□□ 0.97
SNED1Q8TER0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNED1Q8TER0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNED1Q8TER0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNED1Q8TER0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.08■□□□□ 0.97
SNED1Q8TER0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNED1Q8TER0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.08■□□□□ 0.97
SNED1Q8TER0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.08■□□□□ 0.97
SNED1Q8TER0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SNED1Q8TER0 SPDYE11-202ENST00000450699 704 ntBASIC21.08■□□□□ 0.97
SNED1Q8TER0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.08■□□□□ 0.97
SNED1Q8TER0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.08■□□□□ 0.97
SNED1Q8TER0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.08■□□□□ 0.97
SNED1Q8TER0 AC005225.4-201ENST00000557330 545 ntBASIC21.08■□□□□ 0.97
SNED1Q8TER0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SNED1Q8TER0 SPDYE9P-201ENST00000570642 692 ntBASIC21.08■□□□□ 0.97
SNED1Q8TER0 SPDYE10P-202ENST00000612005 668 ntBASIC21.08■□□□□ 0.97
SNED1Q8TER0 SPDYE8P-202ENST00000612377 668 ntBASIC21.08■□□□□ 0.97
SNED1Q8TER0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNED1Q8TER0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNED1Q8TER0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.08■□□□□ 0.96
SNED1Q8TER0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
SNED1Q8TER0 AC129492.6-201ENST00000611383 1305 ntBASIC21.08■□□□□ 0.96
SNED1Q8TER0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SNED1Q8TER0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNED1Q8TER0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNED1Q8TER0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNED1Q8TER0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNED1Q8TER0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 SPDYE14P-201ENST00000442619 822 ntBASIC21.07■□□□□ 0.96
SNED1Q8TER0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNED1Q8TER0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNED1Q8TER0 AC090164.3-201ENST00000610780 2143 ntBASIC21.07■□□□□ 0.96
SNED1Q8TER0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNED1Q8TER0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNED1Q8TER0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNED1Q8TER0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNED1Q8TER0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.07■□□□□ 0.96
SNED1Q8TER0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.06■□□□□ 0.96
SNED1Q8TER0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNED1Q8TER0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNED1Q8TER0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNED1Q8TER0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNED1Q8TER0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNED1Q8TER0 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.06■□□□□ 0.96
SNED1Q8TER0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.06■□□□□ 0.96
SNED1Q8TER0 AL671277.1-201ENST00000429656 993 ntBASIC21.06■□□□□ 0.96
SNED1Q8TER0 SPCS2P4-201ENST00000436160 681 ntBASIC21.06■□□□□ 0.96
SNED1Q8TER0 KLF2P3-201ENST00000451977 1087 ntBASIC21.06■□□□□ 0.96
SNED1Q8TER0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SNED1Q8TER0 FAM86C2P-203ENST00000528684 1004 ntBASIC21.06■□□□□ 0.96
SNED1Q8TER0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.06■□□□□ 0.96
SNED1Q8TER0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNED1Q8TER0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms