Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 AC116407.3-201ENST00000623905 1129 ntBASIC20.32■□□□□ 0.84
PNMA1Q8ND90 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.32■□□□□ 0.84
PNMA1Q8ND90 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.31■□□□□ 0.84
PNMA1Q8ND90 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 AL590627.1-203ENST00000421194 1026 ntBASIC20.3■□□□□ 0.84
PNMA1Q8ND90 KRT18P27-201ENST00000427733 1299 ntBASIC20.3■□□□□ 0.84
PNMA1Q8ND90 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 AC105339.3-201ENST00000560043 636 ntBASIC20.3■□□□□ 0.84
PNMA1Q8ND90 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 AC006557.2-201ENST00000592985 1240 ntBASIC20.3■□□□□ 0.84
PNMA1Q8ND90 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.3■□□□□ 0.84
PNMA1Q8ND90 AC004706.3-202ENST00000621574 984 ntBASIC20.3■□□□□ 0.84
PNMA1Q8ND90 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 AP002414.3-201ENST00000589352 1468 ntBASIC20.3■□□□□ 0.84
PNMA1Q8ND90 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA1Q8ND90 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 IL9RP2-201ENST00000423948 1312 ntBASIC20.29■□□□□ 0.84
PNMA1Q8ND90 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 LINC00982-205ENST00000420957 435 ntBASIC20.29■□□□□ 0.84
PNMA1Q8ND90 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 AC120114.3-201ENST00000611923 658 ntBASIC20.29■□□□□ 0.84
PNMA1Q8ND90 BX640515.1-201ENST00000617215 977 ntBASIC20.29■□□□□ 0.84
PNMA1Q8ND90 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.29■□□□□ 0.84
PNMA1Q8ND90 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.28■□□□□ 0.84
PNMA1Q8ND90 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PNMA1Q8ND90 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.28■□□□□ 0.84
PNMA1Q8ND90 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PNMA1Q8ND90 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms