Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 AC046185.3-201ENST00000623228 1824 ntBASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 UPK3BP1-201ENST00000428678 509 ntBASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 AD001527.2-201ENST00000622994 785 ntBASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT4Q8N9R6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 AC003669.1-201ENST00000334569 611 ntBASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 RCN1P2-201ENST00000398357 915 ntBASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 AC099336.1-202ENST00000602961 463 ntBASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT4Q8N9R6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDRT4Q8N9R6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT4Q8N9R6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT4Q8N9R6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDRT4Q8N9R6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT4Q8N9R6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT4Q8N9R6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT4Q8N9R6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT4Q8N9R6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT4Q8N9R6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT4Q8N9R6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.24■□□□□ 0.19
CDRT4Q8N9R6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms