Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 AF228730.6-201ENST00000641497 218 ntBASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 AC084121.3-201ENST00000641716 218 ntBASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 AC105233.6-201ENST00000642093 218 ntBASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 AC148477.5-201ENST00000625164 1645 ntBASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.82■□□□□ 0.12
RP1L1Q8IWN7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 MRPL20P1-201ENST00000400819 433 ntBASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RP1L1Q8IWN7 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 ELK2BP-201ENST00000415014 1224 ntBASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 RN7SL204P-201ENST00000582831 262 ntBASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 AC022145.2-201ENST00000598203 171 ntBASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 AC004877.2-201ENST00000623941 599 ntBASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms