Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.48■□□□□ 0.39
LDB1Q86U70 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LDB1Q86U70 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
LDB1Q86U70 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.47■□□□□ 0.39
LDB1Q86U70 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 NSUN5P1-202ENST00000421140 1535 ntBASIC17.47■□□□□ 0.39
LDB1Q86U70 NSUN5P2-203ENST00000457352 1529 ntBASIC17.47■□□□□ 0.39
LDB1Q86U70 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LDB1Q86U70 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.47■□□□□ 0.39
LDB1Q86U70 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.47■□□□□ 0.39
LDB1Q86U70 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LDB1Q86U70 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LDB1Q86U70 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.47■□□□□ 0.39
LDB1Q86U70 AC074051.2-201ENST00000565115 352 ntBASIC17.47■□□□□ 0.39
LDB1Q86U70 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.47■□□□□ 0.39
LDB1Q86U70 AC091076.1-201ENST00000610741 619 ntBASIC17.47■□□□□ 0.39
LDB1Q86U70 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.47■□□□□ 0.39
LDB1Q86U70 TP73-AS1-210ENST00000637775 1455 ntBASIC17.47■□□□□ 0.39
LDB1Q86U70 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LDB1Q86U70 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.47■□□□□ 0.39
LDB1Q86U70 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.47■□□□□ 0.39
LDB1Q86U70 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.47■□□□□ 0.39
LDB1Q86U70 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDB1Q86U70 KRT8P10-201ENST00000450021 1447 ntBASIC17.47■□□□□ 0.39
LDB1Q86U70 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LDB1Q86U70 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LDB1Q86U70 AL049757.1-201ENST00000616842 1596 ntBASIC17.46■□□□□ 0.39
LDB1Q86U70 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB1Q86U70 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LDB1Q86U70 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LDB1Q86U70 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB1Q86U70 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB1Q86U70 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB1Q86U70 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
LDB1Q86U70 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB1Q86U70 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB1Q86U70 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
LDB1Q86U70 FAM220CP-201ENST00000395253 831 ntBASIC17.46■□□□□ 0.39
LDB1Q86U70 IGHV3-47-201ENST00000425060 335 ntBASIC17.46■□□□□ 0.39
LDB1Q86U70 MINOS1P3-201ENST00000457048 203 ntBASIC17.46■□□□□ 0.39
LDB1Q86U70 AC002558.1-201ENST00000488906 803 ntBASIC17.46■□□□□ 0.39
LDB1Q86U70 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.46■□□□□ 0.39
LDB1Q86U70 BNIP3P18-201ENST00000593976 575 ntBASIC17.46■□□□□ 0.39
LDB1Q86U70 Z69720.1-201ENST00000601483 472 ntBASIC17.46■□□□□ 0.39
LDB1Q86U70 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.46■□□□□ 0.39
LDB1Q86U70 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB1Q86U70 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB1Q86U70 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.46■□□□□ 0.39
LDB1Q86U70 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.46■□□□□ 0.38
LDB1Q86U70 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.46■□□□□ 0.38
LDB1Q86U70 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
LDB1Q86U70 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.46■□□□□ 0.38
LDB1Q86U70 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LDB1Q86U70 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.45■□□□□ 0.38
LDB1Q86U70 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.45■□□□□ 0.38
LDB1Q86U70 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
LDB1Q86U70 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LDB1Q86U70 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LDB1Q86U70 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.45■□□□□ 0.38
LDB1Q86U70 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.45■□□□□ 0.38
LDB1Q86U70 AC096582.2-201ENST00000510860 516 ntBASIC17.45■□□□□ 0.38
LDB1Q86U70 AC009533.2-201ENST00000543664 586 ntBASIC17.45■□□□□ 0.38
LDB1Q86U70 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.45■□□□□ 0.38
LDB1Q86U70 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LDB1Q86U70 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.45■□□□□ 0.38
LDB1Q86U70 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms