Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 AL132655.2-201ENST00000596276 594 ntBASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 AC003669.1-201ENST00000334569 611 ntBASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 CALY-202ENST00000368555 783 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 PTCHD3P3-201ENST00000403073 906 ntBASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 PC-208ENST00000529047 1607 ntTSL 3 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 ACTL9-202ENST00000612068 1252 ntBASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 AC092919.2-201ENST00000623631 1645 ntBASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 POR-209ENST00000439269 1858 ntTSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 TERF1P3-201ENST00000505638 1227 ntBASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms