Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 AC141586.5-201ENST00000624546 2050 ntBASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 STARP1-201ENST00000397973 869 ntBASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 AC113347.1-201ENST00000413321 391 ntBASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 BX664615.1-201ENST00000443558 458 ntBASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 AC010203.1-204ENST00000548782 407 ntBASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 GXYLT1P4-201ENST00000613576 1192 ntBASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 AC133561.5-201ENST00000635547 218 ntBASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 LINC00304-203ENST00000565008 1864 ntBASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 AC138969.2-201ENST00000532739 9932 ntBASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL55Q7Z7F7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms