Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC140878.1-201ENST00000565277 250 ntBASIC12.06□□□□□ -0.48
CSMD3Q7Z407 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CSMD3Q7Z407 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 AC073592.3-201ENST00000625118 1834 ntBASIC12.05□□□□□ -0.48
CSMD3Q7Z407 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 SPCS2P4-201ENST00000436160 681 ntBASIC12.05□□□□□ -0.48
CSMD3Q7Z407 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 SLC25A39P2-201ENST00000537614 270 ntBASIC12.05□□□□□ -0.48
CSMD3Q7Z407 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 AL390754.1-201ENST00000619088 582 ntBASIC12.05□□□□□ -0.48
CSMD3Q7Z407 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 AL031598.1-201ENST00000561511 1773 ntBASIC12.05□□□□□ -0.48
CSMD3Q7Z407 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 PIN1P1-201ENST00000412108 996 ntBASIC12.05□□□□□ -0.48
CSMD3Q7Z407 AC107918.2-201ENST00000530817 355 ntBASIC12.05□□□□□ -0.48
CSMD3Q7Z407 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD3Q7Z407 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 SLC25A6P2-201ENST00000497974 877 ntBASIC12.04□□□□□ -0.48
CSMD3Q7Z407 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 AC079140.1-201ENST00000508039 487 ntBASIC12.04□□□□□ -0.48
CSMD3Q7Z407 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 REXO1L11P-201ENST00000620964 1927 ntBASIC12.04□□□□□ -0.48
CSMD3Q7Z407 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 AC002056.1-201ENST00000395613 760 ntBASIC12.04□□□□□ -0.48
CSMD3Q7Z407 RN7SL589P-201ENST00000481268 310 ntBASIC12.04□□□□□ -0.48
CSMD3Q7Z407 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 AC027307.3-201ENST00000594262 1100 ntBASIC12.04□□□□□ -0.48
CSMD3Q7Z407 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
CSMD3Q7Z407 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms