Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TREML4Q6UXN2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TREML4Q6UXN2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TREML4Q6UXN2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TREML4Q6UXN2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TREML4Q6UXN2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TREML4Q6UXN2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TREML4Q6UXN2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 Z83836.1-201ENST00000624605 1642 ntBASIC14.37□□□□□ -0.11
TREML4Q6UXN2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 AL163051.1-201ENST00000569214 1512 ntBASIC14.37□□□□□ -0.11
TREML4Q6UXN2 GPAT2P1-201ENST00000444924 1672 ntBASIC14.37□□□□□ -0.11
TREML4Q6UXN2 AC124067.4-201ENST00000519691 2379 ntBASIC14.37□□□□□ -0.11
TREML4Q6UXN2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 AKR1C7P-201ENST00000305623 895 ntBASIC14.37□□□□□ -0.11
TREML4Q6UXN2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 HMGN1P19-201ENST00000436976 333 ntBASIC14.37□□□□□ -0.11
TREML4Q6UXN2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 AC090142.2-201ENST00000483263 416 ntBASIC14.37□□□□□ -0.11
TREML4Q6UXN2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 LINC02084-201ENST00000606069 1096 ntBASIC14.37□□□□□ -0.11
TREML4Q6UXN2 REXO1L6P-202ENST00000619970 1078 ntBASIC14.37□□□□□ -0.11
TREML4Q6UXN2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 AP001094.4-201ENST00000579008 2176 ntBASIC14.37□□□□□ -0.11
TREML4Q6UXN2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREML4Q6UXN2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 AC233702.3-201ENST00000578656 1387 ntBASIC14.36□□□□□ -0.11
TREML4Q6UXN2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 AC022211.2-201ENST00000585075 2527 ntBASIC14.36□□□□□ -0.11
TREML4Q6UXN2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 MIR149-201ENST00000384879 89 ntBASIC14.36□□□□□ -0.11
TREML4Q6UXN2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 SEC1P-202ENST00000473944 940 ntBASIC14.36□□□□□ -0.11
TREML4Q6UXN2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms