Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 AC009947.1-201ENST00000444350 727 ntBASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 AC018470.1-201ENST00000624790 3129 ntBASIC19.45■□□□□ 0.7
SWSAP1Q6NVH7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 TERC-201ENST00000602385 541 ntBASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SWSAP1Q6NVH7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 AL135999.2-201ENST00000622438 1686 ntBASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 AL353135.1-201ENST00000606729 504 ntBASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.43■□□□□ 0.7
SWSAP1Q6NVH7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 AC140113.2-201ENST00000604370 208 ntBASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 AC027601.4-201ENST00000611259 610 ntBASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms