Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 AL020989.1-201ENST00000422979 469 ntBASIC18.17■□□□□ 0.5
TRNP1Q6NT89 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 MTDHP3-201ENST00000594186 672 ntBASIC18.17■□□□□ 0.5
TRNP1Q6NT89 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 AL355877.3-201ENST00000622820 899 ntBASIC18.17■□□□□ 0.5
TRNP1Q6NT89 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.17■□□□□ 0.5
TRNP1Q6NT89 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRNP1Q6NT89 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 SART3-203ENST00000546611 1184 ntBASIC18.16■□□□□ 0.5
TRNP1Q6NT89 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 NKAPP1-205ENST00000585790 367 ntBASIC18.16■□□□□ 0.5
TRNP1Q6NT89 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 AC022211.2-201ENST00000585075 2527 ntBASIC18.16■□□□□ 0.5
TRNP1Q6NT89 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRNP1Q6NT89 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 AC093525.9-201ENST00000624961 1746 ntBASIC18.15■□□□□ 0.5
TRNP1Q6NT89 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 RBM17P3-201ENST00000417687 1192 ntBASIC18.15■□□□□ 0.5
TRNP1Q6NT89 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 EMBP1-201ENST00000458200 901 ntBASIC18.15■□□□□ 0.5
TRNP1Q6NT89 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 AC008608.2-201ENST00000606089 416 ntBASIC18.15■□□□□ 0.5
TRNP1Q6NT89 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.15■□□□□ 0.5
TRNP1Q6NT89 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms