Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 DRAXINP1-201ENST00000437611 948 ntBASIC18.15■□□□□ 0.5
LRRC38Q5VT99 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 TSSC2-201ENST00000450217 709 ntBASIC18.15■□□□□ 0.5
LRRC38Q5VT99 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 AD001527.2-201ENST00000622994 785 ntBASIC18.15■□□□□ 0.5
LRRC38Q5VT99 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.5
LRRC38Q5VT99 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.14■□□□□ 0.5
LRRC38Q5VT99 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 AC009336.1-201ENST00000608941 1553 ntBASIC18.14■□□□□ 0.49
LRRC38Q5VT99 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 AC124947.2-201ENST00000547118 1133 ntBASIC18.14■□□□□ 0.49
LRRC38Q5VT99 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 AC233702.3-201ENST00000578656 1387 ntBASIC18.14■□□□□ 0.49
LRRC38Q5VT99 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC38Q5VT99 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 AC011676.5-201ENST00000624864 2660 ntBASIC18.13■□□□□ 0.49
LRRC38Q5VT99 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 AC003669.1-201ENST00000334569 611 ntBASIC18.13■□□□□ 0.49
LRRC38Q5VT99 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 FAM210CP-201ENST00000445714 574 ntBASIC18.13■□□□□ 0.49
LRRC38Q5VT99 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 TP73-AS1-210ENST00000637775 1455 ntBASIC18.13■□□□□ 0.49
LRRC38Q5VT99 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC38Q5VT99 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms