Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 YTHDF3-AS1-201ENST00000603538 718 ntBASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 AL592309.1-201ENST00000443127 649 ntBASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPAQ5VT25 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 HLA-DRB6-201ENST00000411500 1235 ntBASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 UGT1A2P-201ENST00000454886 866 ntBASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 AC239800.4-201ENST00000603712 296 ntBASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPAQ5VT25 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 KLF2P3-201ENST00000451977 1087 ntBASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC26.14■■□□□ 1.78
CDC42BPAQ5VT25 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 HMGA1P7-201ENST00000406908 502 ntBASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 FAM86C2P-203ENST00000528684 1004 ntBASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 AC084121.4-201ENST00000641598 221 ntBASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 AF228730.8-201ENST00000642140 221 ntBASIC26.14■■□□□ 1.77
CDC42BPAQ5VT25 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 AC005412.3-201ENST00000580309 715 ntBASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 MIR4515-201ENST00000584082 81 ntBASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPAQ5VT25 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms