Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 AC093525.9-201ENST00000624961 1746 ntBASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 AL441883.1-201ENST00000566170 1045 ntBASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 AL031432.5-201ENST00000641059 760 ntBASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RUNDC3AQ59EK9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 AL353692.3-201ENST00000407031 1396 ntBASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 AC097374.2-201ENST00000618617 1306 ntBASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 SPDYE15P-201ENST00000424157 909 ntBASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms