Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 NFIC-211ENST00000641145 8399 ntBASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 WWOX-216ENST00000569818 525 ntBASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 AC113410.3-201ENST00000623366 203 ntBASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 AC078925.2-201ENST00000624013 1973 ntBASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ANKRD55Q3KP44 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 FAM197Y1-201ENST00000421178 764 ntBASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 AC097488.1-201ENST00000507834 756 ntBASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 AC010240.3-201ENST00000607688 395 ntBASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 AC026471.5-201ENST00000615068 467 ntBASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms