Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CBX1P83916 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CBX1P83916 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CBX1P83916 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CBX1P83916 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.3■□□□□ 0.52
CBX1P83916 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.3■□□□□ 0.52
CBX1P83916 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CBX1P83916 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC18.3■□□□□ 0.52
CBX1P83916 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CBX1P83916 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.3■□□□□ 0.52
CBX1P83916 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.3■□□□□ 0.52
CBX1P83916 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 AC126755.1-201ENST00000525846 6405 ntBASIC18.29■□□□□ 0.52
CBX1P83916 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.29■□□□□ 0.52
CBX1P83916 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CBX1P83916 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CBX1P83916 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CBX1P83916 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.29■□□□□ 0.52
CBX1P83916 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.29■□□□□ 0.52
CBX1P83916 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 HTR7P1-201ENST00000538670 1336 ntBASIC18.29■□□□□ 0.52
CBX1P83916 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.29■□□□□ 0.52
CBX1P83916 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
CBX1P83916 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CBX1P83916 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.29■□□□□ 0.52
CBX1P83916 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 YBX1P10-201ENST00000444752 975 ntBASIC18.29■□□□□ 0.52
CBX1P83916 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.29■□□□□ 0.52
CBX1P83916 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CBX1P83916 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.29■□□□□ 0.52
CBX1P83916 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CBX1P83916 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.29■□□□□ 0.52
CBX1P83916 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CBX1P83916 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CBX1P83916 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX1P83916 AC015656.1-201ENST00000624209 3578 ntBASIC18.29■□□□□ 0.52
CBX1P83916 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.28■□□□□ 0.52
CBX1P83916 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CBX1P83916 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.28■□□□□ 0.52
CBX1P83916 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.28■□□□□ 0.52
CBX1P83916 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.28■□□□□ 0.52
CBX1P83916 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CBX1P83916 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CBX1P83916 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.28■□□□□ 0.52
CBX1P83916 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CBX1P83916 C2orf69P4-201ENST00000565394 541 ntBASIC18.28■□□□□ 0.52
CBX1P83916 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CBX1P83916 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.28■□□□□ 0.52
CBX1P83916 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CBX1P83916 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CBX1P83916 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.28■□□□□ 0.52
CBX1P83916 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.28■□□□□ 0.52
CBX1P83916 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.28■□□□□ 0.52
CBX1P83916 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.28■□□□□ 0.52
CBX1P83916 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.28■□□□□ 0.52
CBX1P83916 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX1P83916 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CBX1P83916 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CBX1P83916 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms