Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.3■□□□□ 0.04
HIST1H3AP68431 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST1H3AP68431 BNIP3P18-201ENST00000593976 575 ntBASIC15.3■□□□□ 0.04
HIST1H3AP68431 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H3AP68431 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST1H3AP68431 AL445228.2-201ENST00000605589 952 ntBASIC15.3■□□□□ 0.04
HIST1H3AP68431 AC091076.1-201ENST00000610741 619 ntBASIC15.3■□□□□ 0.04
HIST1H3AP68431 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST1H3AP68431 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST1H3AP68431 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST1H3AP68431 AD001527.2-201ENST00000622994 785 ntBASIC15.3■□□□□ 0.04
HIST1H3AP68431 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST1H3AP68431 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
HIST1H3AP68431 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H3AP68431 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H3AP68431 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H3AP68431 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST1H3AP68431 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 INTS4P1-201ENST00000438455 1935 ntBASIC15.29■□□□□ 0.04
HIST1H3AP68431 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 ATP5G2P1-201ENST00000433580 426 ntBASIC15.29■□□□□ 0.04
HIST1H3AP68431 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 AC069148.1-201ENST00000608741 768 ntBASIC15.29■□□□□ 0.04
HIST1H3AP68431 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HIST1H3AP68431 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H3AP68431 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 AC046185.3-201ENST00000623228 1824 ntBASIC15.28■□□□□ 0.04
HIST1H3AP68431 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H3AP68431 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H3AP68431 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.27■□□□□ 0.04
HIST1H3AP68431 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H3AP68431 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H3AP68431 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H3AP68431 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms