Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
SEC61A1P61619 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SEC61A1P61619 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.37■□□□□ 0.05
SEC61A1P61619 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.37■□□□□ 0.05
SEC61A1P61619 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
SEC61A1P61619 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.37■□□□□ 0.05
SEC61A1P61619 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.37■□□□□ 0.05
SEC61A1P61619 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SEC61A1P61619 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SEC61A1P61619 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SEC61A1P61619 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
SEC61A1P61619 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.37■□□□□ 0.05
SEC61A1P61619 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.37■□□□□ 0.05
SEC61A1P61619 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SEC61A1P61619 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 AP000593.1-201ENST00000393668 712 ntBASIC15.37■□□□□ 0.05
SEC61A1P61619 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.37■□□□□ 0.05
SEC61A1P61619 AL645929.1-201ENST00000420084 975 ntBASIC15.37■□□□□ 0.05
SEC61A1P61619 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.37■□□□□ 0.05
SEC61A1P61619 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.37■□□□□ 0.05
SEC61A1P61619 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.37■□□□□ 0.05
SEC61A1P61619 AL136038.4-201ENST00000603606 1261 ntBASIC15.37■□□□□ 0.05
SEC61A1P61619 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 AL391807.1-203ENST00000604392 2365 ntBASIC15.37■□□□□ 0.05
SEC61A1P61619 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.37■□□□□ 0.05
SEC61A1P61619 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.37■□□□□ 0.05
SEC61A1P61619 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.37■□□□□ 0.05
SEC61A1P61619 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SEC61A1P61619 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SEC61A1P61619 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 GMCL1P1-201ENST00000463439 1581 ntBASIC15.36■□□□□ 0.05
SEC61A1P61619 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SEC61A1P61619 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SEC61A1P61619 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SEC61A1P61619 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
SEC61A1P61619 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SEC61A1P61619 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
SEC61A1P61619 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
SEC61A1P61619 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.36■□□□□ 0.05
SEC61A1P61619 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.36■□□□□ 0.05
SEC61A1P61619 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.36■□□□□ 0.05
SEC61A1P61619 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 MST1L-201ENST00000442552 2185 ntBASIC15.36■□□□□ 0.05
SEC61A1P61619 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SEC61A1P61619 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.36■□□□□ 0.05
SEC61A1P61619 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.36■□□□□ 0.05
SEC61A1P61619 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SEC61A1P61619 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.36■□□□□ 0.05
SEC61A1P61619 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SEC61A1P61619 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.35■□□□□ 0.05
SEC61A1P61619 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 KRT8P50-201ENST00000562022 1438 ntBASIC15.35■□□□□ 0.05
SEC61A1P61619 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SEC61A1P61619 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms