Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
APOC4P55056 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.82□□□□□ -0.36
APOC4P55056 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 FLJ16779-201ENST00000612722 7638 ntBASIC12.82□□□□□ -0.36
APOC4P55056 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
APOC4P55056 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
APOC4P55056 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC4P55056 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.82□□□□□ -0.36
APOC4P55056 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC4P55056 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.82□□□□□ -0.36
APOC4P55056 HNRNPDP1-201ENST00000439535 754 ntBASIC12.82□□□□□ -0.36
APOC4P55056 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.82□□□□□ -0.36
APOC4P55056 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.82□□□□□ -0.36
APOC4P55056 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.82□□□□□ -0.36
APOC4P55056 RNA5SP419-201ENST00000515908 135 ntBASIC12.82□□□□□ -0.36
APOC4P55056 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.82□□□□□ -0.36
APOC4P55056 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.82□□□□□ -0.36
APOC4P55056 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC4P55056 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.82□□□□□ -0.36
APOC4P55056 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.82□□□□□ -0.36
APOC4P55056 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC4P55056 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
APOC4P55056 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC4P55056 AC116407.3-201ENST00000623905 1129 ntBASIC12.82□□□□□ -0.36
APOC4P55056 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
APOC4P55056 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC4P55056 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
APOC4P55056 AC104581.1-202ENST00000635932 2618 ntBASIC12.82□□□□□ -0.36
APOC4P55056 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC4P55056 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.81□□□□□ -0.36
APOC4P55056 BICD1-207ENST00000551848 1962 ntBASIC12.81□□□□□ -0.36
APOC4P55056 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.81□□□□□ -0.36
APOC4P55056 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 AC132938.5-201ENST00000624980 1813 ntBASIC12.81□□□□□ -0.36
APOC4P55056 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.81□□□□□ -0.36
APOC4P55056 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
APOC4P55056 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.81□□□□□ -0.36
APOC4P55056 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.81□□□□□ -0.36
APOC4P55056 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.81□□□□□ -0.36
APOC4P55056 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.81□□□□□ -0.36
APOC4P55056 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.81□□□□□ -0.36
APOC4P55056 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.81□□□□□ -0.36
APOC4P55056 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.81□□□□□ -0.36
APOC4P55056 LINC01451-201ENST00000623792 534 ntBASIC12.81□□□□□ -0.36
APOC4P55056 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.81□□□□□ -0.36
APOC4P55056 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
APOC4P55056 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.81□□□□□ -0.36
APOC4P55056 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
APOC4P55056 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 AC009336.1-201ENST00000608941 1553 ntBASIC12.81□□□□□ -0.36
APOC4P55056 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
APOC4P55056 AC243591.1-201ENST00000452967 1364 ntBASIC12.81□□□□□ -0.36
APOC4P55056 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.81□□□□□ -0.36
APOC4P55056 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC4P55056 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms