Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RNF144AP50876 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF144AP50876 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 CHCHD2P8-201ENST00000429873 447 ntBASIC16.29■□□□□ 0.2
RNF144AP50876 AP002383.4-201ENST00000442518 975 ntBASIC16.29■□□□□ 0.2
RNF144AP50876 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF144AP50876 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 AC011840.4-201ENST00000578471 627 ntBASIC16.29■□□□□ 0.2
RNF144AP50876 AP002414.4-201ENST00000589764 1148 ntBASIC16.29■□□□□ 0.2
RNF144AP50876 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF144AP50876 AC092119.3-201ENST00000612618 583 ntBASIC16.29■□□□□ 0.2
RNF144AP50876 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF144AP50876 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF144AP50876 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.29■□□□□ 0.2
RNF144AP50876 AC133963.1-201ENST00000504166 1679 ntBASIC16.29■□□□□ 0.2
RNF144AP50876 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF144AP50876 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF144AP50876 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF144AP50876 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF144AP50876 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF144AP50876 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RNF144AP50876 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF144AP50876 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RNF144AP50876 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF144AP50876 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RNF144AP50876 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF144AP50876 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF144AP50876 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF144AP50876 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RNF144AP50876 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 LINC00265-3P-201ENST00000447588 903 ntBASIC16.28■□□□□ 0.2
RNF144AP50876 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.28■□□□□ 0.2
RNF144AP50876 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF144AP50876 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF144AP50876 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF144AP50876 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF144AP50876 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RNF144AP50876 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF144AP50876 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF144AP50876 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF144AP50876 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RNF144AP50876 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
RNF144AP50876 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF144AP50876 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RNF144AP50876 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF144AP50876 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF144AP50876 TOB2P1-201ENST00000469761 992 ntBASIC16.27■□□□□ 0.2
RNF144AP50876 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
RNF144AP50876 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF144AP50876 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF144AP50876 AC090616.6-201ENST00000582640 721 ntBASIC16.27■□□□□ 0.2
RNF144AP50876 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF144AP50876 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF144AP50876 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms