Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.91■□□□□ 0.14
CENPAP49450 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.91■□□□□ 0.14
CENPAP49450 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CENPAP49450 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CENPAP49450 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CENPAP49450 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CENPAP49450 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CENPAP49450 AC141586.5-201ENST00000624546 2050 ntBASIC15.91■□□□□ 0.14
CENPAP49450 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CENPAP49450 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CENPAP49450 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.91■□□□□ 0.14
CENPAP49450 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CENPAP49450 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CENPAP49450 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.91■□□□□ 0.14
CENPAP49450 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.9■□□□□ 0.14
CENPAP49450 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CENPAP49450 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.9■□□□□ 0.14
CENPAP49450 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
CENPAP49450 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CENPAP49450 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CENPAP49450 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CENPAP49450 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CENPAP49450 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CENPAP49450 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.9■□□□□ 0.14
CENPAP49450 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CENPAP49450 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CENPAP49450 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.9■□□□□ 0.14
CENPAP49450 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CENPAP49450 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.9■□□□□ 0.14
CENPAP49450 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CENPAP49450 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.9■□□□□ 0.14
CENPAP49450 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.9■□□□□ 0.14
CENPAP49450 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CENPAP49450 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CENPAP49450 AC011558.1-201ENST00000623459 338 ntBASIC15.9■□□□□ 0.14
CENPAP49450 AC073912.3-201ENST00000624414 853 ntBASIC15.9■□□□□ 0.14
CENPAP49450 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CENPAP49450 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.9■□□□□ 0.14
CENPAP49450 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.9■□□□□ 0.14
CENPAP49450 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CENPAP49450 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.9■□□□□ 0.14
CENPAP49450 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.9■□□□□ 0.14
CENPAP49450 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CENPAP49450 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CENPAP49450 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.9■□□□□ 0.14
CENPAP49450 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.89■□□□□ 0.13
CENPAP49450 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CENPAP49450 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CENPAP49450 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CENPAP49450 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CENPAP49450 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.89■□□□□ 0.13
CENPAP49450 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.89■□□□□ 0.13
CENPAP49450 BX664615.1-201ENST00000443558 458 ntBASIC15.89■□□□□ 0.13
CENPAP49450 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.89■□□□□ 0.13
CENPAP49450 ZNF444P1-201ENST00000559497 298 ntBASIC15.89■□□□□ 0.13
CENPAP49450 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.89■□□□□ 0.13
CENPAP49450 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.89■□□□□ 0.13
CENPAP49450 AC079602.3-201ENST00000623931 403 ntBASIC15.89■□□□□ 0.13
CENPAP49450 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.89■□□□□ 0.13
CENPAP49450 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.89■□□□□ 0.13
CENPAP49450 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CENPAP49450 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.89■□□□□ 0.13
CENPAP49450 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.89■□□□□ 0.13
CENPAP49450 AC009949.1-201ENST00000623048 1830 ntBASIC15.89■□□□□ 0.13
CENPAP49450 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.89■□□□□ 0.13
CENPAP49450 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CENPAP49450 PP12613-201ENST00000424958 2230 ntBASIC15.88■□□□□ 0.13
CENPAP49450 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.88■□□□□ 0.13
CENPAP49450 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.88■□□□□ 0.13
CENPAP49450 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CENPAP49450 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.88■□□□□ 0.13
CENPAP49450 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CENPAP49450 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.88■□□□□ 0.13
CENPAP49450 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CENPAP49450 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CENPAP49450 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CENPAP49450 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CENPAP49450 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CENPAP49450 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CENPAP49450 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CENPAP49450 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CENPAP49450 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.88■□□□□ 0.13
CENPAP49450 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.88■□□□□ 0.13
CENPAP49450 AC113347.1-201ENST00000413321 391 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms