Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.72■□□□□ 0.91
TNNI2P48788 AC023141.13-201ENST00000604991 943 ntBASIC20.72■□□□□ 0.91
TNNI2P48788 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TNNI2P48788 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TNNI2P48788 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.71■□□□□ 0.91
TNNI2P48788 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TNNI2P48788 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
TNNI2P48788 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.71■□□□□ 0.91
TNNI2P48788 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.71■□□□□ 0.91
TNNI2P48788 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.71■□□□□ 0.91
TNNI2P48788 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.71■□□□□ 0.91
TNNI2P48788 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.71■□□□□ 0.91
TNNI2P48788 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.71■□□□□ 0.91
TNNI2P48788 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.71■□□□□ 0.91
TNNI2P48788 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.71■□□□□ 0.91
TNNI2P48788 AL031432.2-201ENST00000566714 459 ntBASIC20.71■□□□□ 0.91
TNNI2P48788 AL928711.1-201ENST00000570165 459 ntBASIC20.71■□□□□ 0.91
TNNI2P48788 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.71■□□□□ 0.91
TNNI2P48788 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.71■□□□□ 0.91
TNNI2P48788 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TNNI2P48788 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TNNI2P48788 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.71■□□□□ 0.91
TNNI2P48788 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNNI2P48788 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TNNI2P48788 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.7■□□□□ 0.91
TNNI2P48788 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNNI2P48788 AC025580.3-201ENST00000617932 1424 ntBASIC20.7■□□□□ 0.9
TNNI2P48788 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNNI2P48788 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNNI2P48788 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.7■□□□□ 0.9
TNNI2P48788 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNNI2P48788 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNNI2P48788 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.7■□□□□ 0.9
TNNI2P48788 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.7■□□□□ 0.9
TNNI2P48788 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TNNI2P48788 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.7■□□□□ 0.9
TNNI2P48788 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.7■□□□□ 0.9
TNNI2P48788 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNNI2P48788 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.7■□□□□ 0.9
TNNI2P48788 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNNI2P48788 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.7■□□□□ 0.9
TNNI2P48788 FAM58CP-201ENST00000435741 640 ntBASIC20.7■□□□□ 0.9
TNNI2P48788 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
TNNI2P48788 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.7■□□□□ 0.9
TNNI2P48788 OR7E47P-204ENST00000575924 449 ntBASIC20.7■□□□□ 0.9
TNNI2P48788 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.7■□□□□ 0.9
TNNI2P48788 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.7■□□□□ 0.9
TNNI2P48788 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TNNI2P48788 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TNNI2P48788 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.7■□□□□ 0.9
TNNI2P48788 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNNI2P48788 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNNI2P48788 PI4KAP1-204ENST00000612579 1703 ntBASIC20.7■□□□□ 0.9
TNNI2P48788 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNNI2P48788 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.7■□□□□ 0.9
TNNI2P48788 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.7■□□□□ 0.9
TNNI2P48788 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.69■□□□□ 0.9
TNNI2P48788 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.69■□□□□ 0.9
TNNI2P48788 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.69■□□□□ 0.9
TNNI2P48788 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.69■□□□□ 0.9
TNNI2P48788 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.69■□□□□ 0.9
TNNI2P48788 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TNNI2P48788 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 AP000344.2-201ENST00000512987 629 ntBASIC20.69■□□□□ 0.9
TNNI2P48788 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
TNNI2P48788 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI2P48788 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms