Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.12■□□□□ 0.01
CBX5P45973 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX5P45973 AC116562.2-201ENST00000507042 360 ntBASIC15.12■□□□□ 0.01
CBX5P45973 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.12■□□□□ 0.01
CBX5P45973 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.12■□□□□ 0.01
CBX5P45973 C1QBPP2-201ENST00000528754 825 ntBASIC15.12■□□□□ 0.01
CBX5P45973 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.12■□□□□ 0.01
CBX5P45973 AC112497.1-201ENST00000624824 639 ntBASIC15.12■□□□□ 0.01
CBX5P45973 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.12■□□□□ 0.01
CBX5P45973 AC100803.2-201ENST00000562459 1963 ntBASIC15.12■□□□□ 0.01
CBX5P45973 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CBX5P45973 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CBX5P45973 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CBX5P45973 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 AC132938.6-201ENST00000623828 1655 ntBASIC15.12■□□□□ 0.01
CBX5P45973 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX5P45973 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX5P45973 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.12■□□□□ 0.01
CBX5P45973 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CBX5P45973 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CBX5P45973 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX5P45973 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CBX5P45973 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.11■□□□□ 0.01
CBX5P45973 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CBX5P45973 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CBX5P45973 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CBX5P45973 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CBX5P45973 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX5P45973 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.11■□□□□ 0.01
CBX5P45973 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX5P45973 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX5P45973 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.11■□□□□ 0.01
CBX5P45973 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.11■□□□□ 0.01
CBX5P45973 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
CBX5P45973 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.11■□□□□ 0.01
CBX5P45973 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.11■□□□□ 0.01
CBX5P45973 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX5P45973 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.11■□□□□ 0.01
CBX5P45973 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX5P45973 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX5P45973 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.1■□□□□ 0.01
CBX5P45973 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.1■□□□□ 0.01
CBX5P45973 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.1■□□□□ 0.01
CBX5P45973 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CBX5P45973 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CBX5P45973 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.1■□□□□ 0.01
CBX5P45973 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CBX5P45973 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CBX5P45973 FAM197Y1-201ENST00000421178 764 ntBASIC15.1■□□□□ 0.01
CBX5P45973 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.1■□□□□ 0.01
CBX5P45973 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.1■□□□□ 0.01
CBX5P45973 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.1■□□□□ 0.01
CBX5P45973 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.1■□□□□ 0.01
CBX5P45973 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.1■□□□□ 0.01
CBX5P45973 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CBX5P45973 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.1■□□□□ 0.01
CBX5P45973 AC006058.3-201ENST00000606217 1069 ntBASIC15.1■□□□□ 0.01
CBX5P45973 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.1■□□□□ 0.01
CBX5P45973 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.1■□□□□ 0.01
CBX5P45973 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms