Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PBX3P40426 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PBX3P40426 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.61■□□□□ 0.57
PBX3P40426 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.61■□□□□ 0.57
PBX3P40426 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.61■□□□□ 0.57
PBX3P40426 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PBX3P40426 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.61■□□□□ 0.57
PBX3P40426 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.61■□□□□ 0.57
PBX3P40426 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PBX3P40426 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.61■□□□□ 0.57
PBX3P40426 AC106028.4-201ENST00000614509 607 ntBASIC18.61■□□□□ 0.57
PBX3P40426 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.61■□□□□ 0.57
PBX3P40426 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.61■□□□□ 0.57
PBX3P40426 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
PBX3P40426 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.61■□□□□ 0.57
PBX3P40426 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.61■□□□□ 0.57
PBX3P40426 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.61■□□□□ 0.57
PBX3P40426 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PBX3P40426 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.6■□□□□ 0.57
PBX3P40426 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PBX3P40426 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.6■□□□□ 0.57
PBX3P40426 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.6■□□□□ 0.57
PBX3P40426 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.6■□□□□ 0.57
PBX3P40426 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.6■□□□□ 0.57
PBX3P40426 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PBX3P40426 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PBX3P40426 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PBX3P40426 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PBX3P40426 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.6■□□□□ 0.57
PBX3P40426 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.6■□□□□ 0.57
PBX3P40426 RHOQP3-201ENST00000437982 621 ntBASIC18.6■□□□□ 0.57
PBX3P40426 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.6■□□□□ 0.57
PBX3P40426 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.6■□□□□ 0.57
PBX3P40426 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.6■□□□□ 0.57
PBX3P40426 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.6■□□□□ 0.57
PBX3P40426 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 BICD1-207ENST00000551848 1962 ntBASIC18.6■□□□□ 0.57
PBX3P40426 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.6■□□□□ 0.57
PBX3P40426 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.6■□□□□ 0.57
PBX3P40426 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PBX3P40426 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PBX3P40426 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.6■□□□□ 0.57
PBX3P40426 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.59■□□□□ 0.57
PBX3P40426 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PBX3P40426 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PBX3P40426 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.59■□□□□ 0.57
PBX3P40426 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PBX3P40426 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.59■□□□□ 0.57
PBX3P40426 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PBX3P40426 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.59■□□□□ 0.57
PBX3P40426 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PBX3P40426 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PBX3P40426 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.59■□□□□ 0.57
PBX3P40426 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.59■□□□□ 0.57
PBX3P40426 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.59■□□□□ 0.57
PBX3P40426 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.59■□□□□ 0.57
PBX3P40426 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.59■□□□□ 0.57
PBX3P40426 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PBX3P40426 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.59■□□□□ 0.57
PBX3P40426 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.59■□□□□ 0.57
PBX3P40426 AP002472.1-201ENST00000577490 586 ntBASIC18.59■□□□□ 0.57
PBX3P40426 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.59■□□□□ 0.57
PBX3P40426 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PBX3P40426 GGTLC5P-201ENST00000617623 998 ntBASIC18.59■□□□□ 0.57
PBX3P40426 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.59■□□□□ 0.57
PBX3P40426 AC091812.2-201ENST00000619081 385 ntBASIC18.59■□□□□ 0.57
PBX3P40426 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.59■□□□□ 0.57
PBX3P40426 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PBX3P40426 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PBX3P40426 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PBX3P40426 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PBX3P40426 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms