Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
KRT2P35908 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT2P35908 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT2P35908 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT2P35908 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT2P35908 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRT2P35908 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT2P35908 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 PMPCAP1-201ENST00000508114 1576 ntBASIC20.05■□□□□ 0.8
KRT2P35908 AC009336.1-201ENST00000608941 1553 ntBASIC20.05■□□□□ 0.8
KRT2P35908 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT2P35908 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KRT2P35908 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT2P35908 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
KRT2P35908 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.05■□□□□ 0.8
KRT2P35908 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.05■□□□□ 0.8
KRT2P35908 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT2P35908 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT2P35908 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.05■□□□□ 0.8
KRT2P35908 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
KRT2P35908 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
KRT2P35908 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
KRT2P35908 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT2P35908 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT2P35908 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT2P35908 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
KRT2P35908 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
KRT2P35908 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT2P35908 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
KRT2P35908 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT2P35908 AP000867.4-201ENST00000641616 219 ntBASIC20.04■□□□□ 0.8
KRT2P35908 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT2P35908 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KRT2P35908 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
KRT2P35908 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT2P35908 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT2P35908 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KRT2P35908 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KRT2P35908 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
KRT2P35908 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
KRT2P35908 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT2P35908 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
KRT2P35908 ABCD1P5-201ENST00000445663 754 ntBASIC20.03■□□□□ 0.8
KRT2P35908 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT2P35908 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT2P35908 PRELID1P1-202ENST00000567272 903 ntBASIC20.03■□□□□ 0.8
KRT2P35908 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.03■□□□□ 0.8
KRT2P35908 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
KRT2P35908 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
KRT2P35908 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
KRT2P35908 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT2P35908 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT2P35908 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT2P35908 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT2P35908 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT2P35908 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.02■□□□□ 0.8
KRT2P35908 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT2P35908 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms