Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
KRT20P35900 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT20P35900 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KRT20P35900 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT20P35900 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KRT20P35900 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
KRT20P35900 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT20P35900 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT20P35900 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KRT20P35900 SPDYE13P-201ENST00000445314 798 ntBASIC16.68■□□□□ 0.26
KRT20P35900 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.68■□□□□ 0.26
KRT20P35900 AC011498.5-201ENST00000592027 486 ntBASIC16.68■□□□□ 0.26
KRT20P35900 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.68■□□□□ 0.26
KRT20P35900 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT20P35900 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.68■□□□□ 0.26
KRT20P35900 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.68■□□□□ 0.26
KRT20P35900 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT20P35900 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT20P35900 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT20P35900 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
KRT20P35900 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KRT20P35900 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT20P35900 AC005332.1-201ENST00000577698 1310 ntBASIC16.68■□□□□ 0.26
KRT20P35900 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
KRT20P35900 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT20P35900 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT20P35900 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KRT20P35900 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT20P35900 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
KRT20P35900 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
KRT20P35900 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 PCED1CP-201ENST00000419887 785 ntBASIC16.67■□□□□ 0.26
KRT20P35900 TSPY22P-201ENST00000427496 604 ntBASIC16.67■□□□□ 0.26
KRT20P35900 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.67■□□□□ 0.26
KRT20P35900 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.67■□□□□ 0.26
KRT20P35900 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 FAM86EP-206ENST00000510506 987 ntBASIC16.67■□□□□ 0.26
KRT20P35900 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT20P35900 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
KRT20P35900 AL390719.2-201ENST00000606993 987 ntBASIC16.67■□□□□ 0.26
KRT20P35900 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KRT20P35900 AC091076.1-201ENST00000610741 619 ntBASIC16.67■□□□□ 0.26
KRT20P35900 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT20P35900 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
KRT20P35900 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT20P35900 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
KRT20P35900 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
KRT20P35900 IER3-202ENST00000376377 1350 ntBASIC16.66■□□□□ 0.26
KRT20P35900 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
KRT20P35900 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
KRT20P35900 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms