Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TERF1P3-201ENST00000505638 1227 ntBASIC21.84■■□□□ 1.09
RFC4P35249 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.84■■□□□ 1.09
RFC4P35249 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.84■■□□□ 1.09
RFC4P35249 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.84■■□□□ 1.09
RFC4P35249 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.84■■□□□ 1.09
RFC4P35249 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.84■■□□□ 1.09
RFC4P35249 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.84■■□□□ 1.09
RFC4P35249 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.84■■□□□ 1.09
RFC4P35249 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.84■■□□□ 1.09
RFC4P35249 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFC4P35249 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RFC4P35249 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFC4P35249 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFC4P35249 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFC4P35249 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFC4P35249 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.83■■□□□ 1.09
RFC4P35249 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFC4P35249 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFC4P35249 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.83■■□□□ 1.09
RFC4P35249 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
RFC4P35249 AL135999.2-201ENST00000622438 1686 ntBASIC21.83■■□□□ 1.09
RFC4P35249 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RFC4P35249 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFC4P35249 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.83■■□□□ 1.09
RFC4P35249 FAM58DP-201ENST00000428076 619 ntBASIC21.83■■□□□ 1.09
RFC4P35249 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.83■■□□□ 1.09
RFC4P35249 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.83■■□□□ 1.09
RFC4P35249 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFC4P35249 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.83■■□□□ 1.09
RFC4P35249 AL512356.2-201ENST00000546955 174 ntBASIC21.83■■□□□ 1.09
RFC4P35249 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.83■■□□□ 1.09
RFC4P35249 AC087641.1-201ENST00000557561 1021 ntBASIC21.83■■□□□ 1.09
RFC4P35249 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.83■■□□□ 1.09
RFC4P35249 AL645728.2-201ENST00000641974 660 ntBASIC21.83■■□□□ 1.09
RFC4P35249 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.83■■□□□ 1.09
RFC4P35249 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFC4P35249 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFC4P35249 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.83■■□□□ 1.08
RFC4P35249 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RFC4P35249 AL020996.1-203ENST00000536896 2307 ntBASIC21.83■■□□□ 1.08
RFC4P35249 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
RFC4P35249 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFC4P35249 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC4P35249 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFC4P35249 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RFC4P35249 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.82■■□□□ 1.08
RFC4P35249 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFC4P35249 AC135776.1-201ENST00000319817 2481 ntBASIC21.82■■□□□ 1.08
RFC4P35249 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC4P35249 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
RFC4P35249 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.82■■□□□ 1.08
RFC4P35249 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.82■■□□□ 1.08
RFC4P35249 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.82■■□□□ 1.08
RFC4P35249 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.82■■□□□ 1.08
RFC4P35249 AC002472.2-201ENST00000442739 958 ntBASIC21.82■■□□□ 1.08
RFC4P35249 TSPY16P-201ENST00000449843 468 ntBASIC21.82■■□□□ 1.08
RFC4P35249 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFC4P35249 AC243562.1-201ENST00000560672 389 ntBASIC21.82■■□□□ 1.08
RFC4P35249 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.82■■□□□ 1.08
RFC4P35249 AP001059.3-201ENST00000619053 235 ntBASIC21.82■■□□□ 1.08
RFC4P35249 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.82■■□□□ 1.08
RFC4P35249 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.82■■□□□ 1.08
RFC4P35249 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.82■■□□□ 1.08
RFC4P35249 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RFC4P35249 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC4P35249 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC4P35249 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC4P35249 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC4P35249 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
RFC4P35249 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFC4P35249 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.81■■□□□ 1.08
RFC4P35249 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC4P35249 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC4P35249 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFC4P35249 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC4P35249 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RFC4P35249 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.81■■□□□ 1.08
RFC4P35249 KLF2P3-201ENST00000451977 1087 ntBASIC21.81■■□□□ 1.08
RFC4P35249 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
RFC4P35249 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.81■■□□□ 1.08
RFC4P35249 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC4P35249 RN7SL204P-201ENST00000582831 262 ntBASIC21.81■■□□□ 1.08
RFC4P35249 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.81■■□□□ 1.08
RFC4P35249 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC4P35249 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.81■■□□□ 1.08
RFC4P35249 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.81■■□□□ 1.08
RFC4P35249 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC4P35249 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RFC4P35249 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.81■■□□□ 1.08
RFC4P35249 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RFC4P35249 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RFC4P35249 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
RFC4P35249 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC4P35249 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.8■■□□□ 1.08
RFC4P35249 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFC4P35249 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.8■■□□□ 1.08
RFC4P35249 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFC4P35249 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC4P35249 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.8■■□□□ 1.08
RFC4P35249 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms