Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 IGHV3-65-201ENST00000523210 341 ntBASIC16.8■□□□□ 0.28
CCKBRP32239 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.8■□□□□ 0.28
CCKBRP32239 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.8■□□□□ 0.28
CCKBRP32239 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.8■□□□□ 0.28
CCKBRP32239 AC008667.4-201ENST00000607370 168 ntBASIC16.8■□□□□ 0.28
CCKBRP32239 AC116407.2-201ENST00000613639 860 ntBASIC16.8■□□□□ 0.28
CCKBRP32239 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.8■□□□□ 0.28
CCKBRP32239 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCKBRP32239 AC148477.5-201ENST00000625164 1645 ntBASIC16.8■□□□□ 0.28
CCKBRP32239 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.8■□□□□ 0.28
CCKBRP32239 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
CCKBRP32239 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.79■□□□□ 0.28
CCKBRP32239 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CCKBRP32239 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCKBRP32239 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCKBRP32239 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.79■□□□□ 0.28
CCKBRP32239 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.79■□□□□ 0.28
CCKBRP32239 VN2R19P-201ENST00000442399 1052 ntBASIC16.79■□□□□ 0.28
CCKBRP32239 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.79■□□□□ 0.28
CCKBRP32239 AC108073.2-201ENST00000464002 357 ntBASIC16.79■□□□□ 0.28
CCKBRP32239 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.79■□□□□ 0.28
CCKBRP32239 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.79■□□□□ 0.28
CCKBRP32239 AC019129.2-201ENST00000609837 1235 ntBASIC16.79■□□□□ 0.28
CCKBRP32239 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.79■□□□□ 0.28
CCKBRP32239 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.79■□□□□ 0.28
CCKBRP32239 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCKBRP32239 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.79■□□□□ 0.28
CCKBRP32239 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCKBRP32239 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCKBRP32239 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCKBRP32239 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.78■□□□□ 0.28
CCKBRP32239 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.78■□□□□ 0.28
CCKBRP32239 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.78■□□□□ 0.28
CCKBRP32239 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.78■□□□□ 0.28
CCKBRP32239 RPS15P9-201ENST00000494093 319 ntBASIC16.78■□□□□ 0.28
CCKBRP32239 YBX1P5-201ENST00000509441 847 ntBASIC16.78■□□□□ 0.28
CCKBRP32239 AC005829.1-201ENST00000570002 483 ntBASIC16.78■□□□□ 0.28
CCKBRP32239 MIR4751-201ENST00000578027 74 ntBASIC16.78■□□□□ 0.28
CCKBRP32239 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.78■□□□□ 0.28
CCKBRP32239 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.78■□□□□ 0.28
CCKBRP32239 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCKBRP32239 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.78■□□□□ 0.28
CCKBRP32239 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.78■□□□□ 0.28
CCKBRP32239 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCKBRP32239 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.78■□□□□ 0.28
CCKBRP32239 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCKBRP32239 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCKBRP32239 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCKBRP32239 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCKBRP32239 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCKBRP32239 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCKBRP32239 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCKBRP32239 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCKBRP32239 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.77■□□□□ 0.28
CCKBRP32239 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.77■□□□□ 0.28
CCKBRP32239 HCG4B-203ENST00000450128 991 ntBASIC16.77■□□□□ 0.28
CCKBRP32239 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCKBRP32239 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCKBRP32239 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms