Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 MIR770-201ENST00000390219 98 ntBASIC19.87■□□□□ 0.77
CNGA1P29973 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 PRSS29P-201ENST00000440800 595 ntBASIC19.87■□□□□ 0.77
CNGA1P29973 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CNGA1P29973 IGHV3-65-201ENST00000523210 341 ntBASIC19.87■□□□□ 0.77
CNGA1P29973 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.87■□□□□ 0.77
CNGA1P29973 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CNGA1P29973 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.87■□□□□ 0.77
CNGA1P29973 AC008667.4-201ENST00000607370 168 ntBASIC19.87■□□□□ 0.77
CNGA1P29973 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.87■□□□□ 0.77
CNGA1P29973 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CNGA1P29973 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CNGA1P29973 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.87■□□□□ 0.77
CNGA1P29973 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CNGA1P29973 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.86■□□□□ 0.77
CNGA1P29973 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.86■□□□□ 0.77
CNGA1P29973 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.86■□□□□ 0.77
CNGA1P29973 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.86■□□□□ 0.77
CNGA1P29973 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.86■□□□□ 0.77
CNGA1P29973 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.86■□□□□ 0.77
CNGA1P29973 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.86■□□□□ 0.77
CNGA1P29973 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.86■□□□□ 0.77
CNGA1P29973 AC011467.4-201ENST00000594891 528 ntBASIC19.86■□□□□ 0.77
CNGA1P29973 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
CNGA1P29973 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 AC093010.1-201ENST00000473625 1624 ntBASIC19.86■□□□□ 0.77
CNGA1P29973 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.86■□□□□ 0.77
CNGA1P29973 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNGA1P29973 AC132938.5-201ENST00000624980 1813 ntBASIC19.86■□□□□ 0.77
CNGA1P29973 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNGA1P29973 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNGA1P29973 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CNGA1P29973 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CNGA1P29973 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNGA1P29973 ABALON-201ENST00000629058 1903 ntBASIC19.85■□□□□ 0.77
CNGA1P29973 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNGA1P29973 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNGA1P29973 KLF4P1-201ENST00000412782 1185 ntBASIC19.85■□□□□ 0.77
CNGA1P29973 SIGLEC30P-201ENST00000455569 941 ntBASIC19.85■□□□□ 0.77
CNGA1P29973 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
CNGA1P29973 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.85■□□□□ 0.77
CNGA1P29973 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNGA1P29973 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNGA1P29973 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNGA1P29973 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.85■□□□□ 0.77
CNGA1P29973 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNGA1P29973 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.85■□□□□ 0.77
CNGA1P29973 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.85■□□□□ 0.77
CNGA1P29973 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNGA1P29973 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.85■□□□□ 0.77
CNGA1P29973 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.85■□□□□ 0.77
CNGA1P29973 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.84■□□□□ 0.77
CNGA1P29973 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CNGA1P29973 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 AL354751.1-201ENST00000412768 1863 ntBASIC19.84■□□□□ 0.77
CNGA1P29973 REXO1L9P-201ENST00000604264 2108 ntBASIC19.84■□□□□ 0.77
CNGA1P29973 BCAR1-209ENST00000546196 1340 ntBASIC19.84■□□□□ 0.77
CNGA1P29973 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.84■□□□□ 0.77
CNGA1P29973 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.84■□□□□ 0.77
CNGA1P29973 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.84■□□□□ 0.77
CNGA1P29973 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.84■□□□□ 0.77
CNGA1P29973 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.84■□□□□ 0.77
CNGA1P29973 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.84■□□□□ 0.77
CNGA1P29973 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CNGA1P29973 AL031432.2-201ENST00000566714 459 ntBASIC19.84■□□□□ 0.77
CNGA1P29973 AL928711.1-201ENST00000570165 459 ntBASIC19.84■□□□□ 0.77
CNGA1P29973 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.84■□□□□ 0.77
CNGA1P29973 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.84■□□□□ 0.77
CNGA1P29973 AC004877.2-201ENST00000623941 599 ntBASIC19.84■□□□□ 0.77
CNGA1P29973 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.84■□□□□ 0.77
CNGA1P29973 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.84■□□□□ 0.77
CNGA1P29973 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 AL353593.2-201ENST00000602529 1483 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms