Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.24■□□□□ 0.83
ERCC3P19447 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.24■□□□□ 0.83
ERCC3P19447 AC004706.3-202ENST00000621574 984 ntBASIC20.24■□□□□ 0.83
ERCC3P19447 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.24■□□□□ 0.83
ERCC3P19447 AC134684.3-201ENST00000641758 218 ntBASIC20.24■□□□□ 0.83
ERCC3P19447 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
ERCC3P19447 AC132938.5-201ENST00000624980 1813 ntBASIC20.24■□□□□ 0.83
ERCC3P19447 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ERCC3P19447 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC3P19447 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC3P19447 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
ERCC3P19447 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC3P19447 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.23■□□□□ 0.83
ERCC3P19447 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.23■□□□□ 0.83
ERCC3P19447 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.23■□□□□ 0.83
ERCC3P19447 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.23■□□□□ 0.83
ERCC3P19447 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.23■□□□□ 0.83
ERCC3P19447 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
ERCC3P19447 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.23■□□□□ 0.83
ERCC3P19447 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.23■□□□□ 0.83
ERCC3P19447 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.23■□□□□ 0.83
ERCC3P19447 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ERCC3P19447 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.23■□□□□ 0.83
ERCC3P19447 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ERCC3P19447 AC148477.5-201ENST00000625164 1645 ntBASIC20.23■□□□□ 0.83
ERCC3P19447 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC3P19447 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC3P19447 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC3P19447 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ERCC3P19447 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC3P19447 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC3P19447 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC3P19447 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC3P19447 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC3P19447 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ERCC3P19447 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC3P19447 ELK2BP-201ENST00000415014 1224 ntBASIC20.22■□□□□ 0.83
ERCC3P19447 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC3P19447 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC3P19447 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
ERCC3P19447 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.22■□□□□ 0.83
ERCC3P19447 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC3P19447 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC3P19447 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC3P19447 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC3P19447 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC3P19447 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC3P19447 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC3P19447 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC3P19447 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC3P19447 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ERCC3P19447 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC3P19447 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ERCC3P19447 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 AC006504.4-201ENST00000592118 1568 ntBASIC20.21■□□□□ 0.83
ERCC3P19447 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.21■□□□□ 0.83
ERCC3P19447 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.21■□□□□ 0.83
ERCC3P19447 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
ERCC3P19447 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ERCC3P19447 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ERCC3P19447 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.21■□□□□ 0.83
ERCC3P19447 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.21■□□□□ 0.83
ERCC3P19447 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC3P19447 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC3P19447 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC3P19447 MTDHP5-201ENST00000598980 586 ntBASIC20.21■□□□□ 0.83
ERCC3P19447 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.21■□□□□ 0.83
ERCC3P19447 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.21■□□□□ 0.83
ERCC3P19447 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC3P19447 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 AC079781.4-201ENST00000641908 219 ntBASIC20.21■□□□□ 0.83
ERCC3P19447 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ERCC3P19447 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
ERCC3P19447 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC3P19447 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 LTB4R2-202ENST00000528054 3092 ntBASIC20.21■□□□□ 0.83
ERCC3P19447 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms