Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NCLP19338 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NCLP19338 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.85■□□□□ 0.93
NCLP19338 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.85■□□□□ 0.93
NCLP19338 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.85■□□□□ 0.93
NCLP19338 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.85■□□□□ 0.93
NCLP19338 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NCLP19338 AL138966.2-201ENST00000621997 464 ntBASIC20.85■□□□□ 0.93
NCLP19338 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.85■□□□□ 0.93
NCLP19338 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.85■□□□□ 0.93
NCLP19338 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCLP19338 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NCLP19338 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
NCLP19338 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NCLP19338 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 ARMC10P1-201ENST00000313754 855 ntBASIC20.84■□□□□ 0.93
NCLP19338 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.84■□□□□ 0.93
NCLP19338 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.84■□□□□ 0.93
NCLP19338 BX664615.1-201ENST00000443558 458 ntBASIC20.84■□□□□ 0.93
NCLP19338 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.84■□□□□ 0.93
NCLP19338 WWOX-216ENST00000569818 525 ntBASIC20.84■□□□□ 0.93
NCLP19338 AL121761.2-201ENST00000598007 1648 ntBASIC20.84■□□□□ 0.93
NCLP19338 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 AC079328.2-201ENST00000561241 3354 ntBASIC20.84■□□□□ 0.93
NCLP19338 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NCLP19338 AL138688.1-201ENST00000624851 1594 ntBASIC20.84■□□□□ 0.93
NCLP19338 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NCLP19338 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.84■□□□□ 0.93
NCLP19338 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.84■□□□□ 0.93
NCLP19338 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NCLP19338 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NCLP19338 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.83■□□□□ 0.93
NCLP19338 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NCLP19338 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.83■□□□□ 0.93
NCLP19338 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.83■□□□□ 0.93
NCLP19338 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCLP19338 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NCLP19338 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.83■□□□□ 0.93
NCLP19338 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.83■□□□□ 0.93
NCLP19338 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCLP19338 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.83■□□□□ 0.93
NCLP19338 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.83■□□□□ 0.93
NCLP19338 AC104390.1-201ENST00000555663 520 ntBASIC20.83■□□□□ 0.93
NCLP19338 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NCLP19338 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.83■□□□□ 0.93
NCLP19338 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.83■□□□□ 0.93
NCLP19338 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
NCLP19338 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NCLP19338 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NCLP19338 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
NCLP19338 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
NCLP19338 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
NCLP19338 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NCLP19338 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NCLP19338 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NCLP19338 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.83■□□□□ 0.92
NCLP19338 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
NCLP19338 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NCLP19338 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.82■□□□□ 0.92
NCLP19338 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NCLP19338 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.82■□□□□ 0.92
NCLP19338 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms