Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN1P18031 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN1P18031 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN1P18031 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN1P18031 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.52■□□□□ 0.55
PTPN1P18031 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.52■□□□□ 0.55
PTPN1P18031 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PTPN1P18031 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN1P18031 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.52■□□□□ 0.55
PTPN1P18031 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN1P18031 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN1P18031 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN1P18031 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN1P18031 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PTPN1P18031 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN1P18031 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN1P18031 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN1P18031 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PTPN1P18031 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN1P18031 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN1P18031 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PTPN1P18031 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN1P18031 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PTPN1P18031 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN1P18031 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN1P18031 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN1P18031 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PTPN1P18031 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.51■□□□□ 0.55
PTPN1P18031 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN1P18031 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN1P18031 AC093909.1-201ENST00000504731 1122 ntBASIC18.51■□□□□ 0.55
PTPN1P18031 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.51■□□□□ 0.55
PTPN1P18031 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN1P18031 AC012640.2-201ENST00000561606 901 ntBASIC18.51■□□□□ 0.55
PTPN1P18031 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.51■□□□□ 0.55
PTPN1P18031 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.51■□□□□ 0.55
PTPN1P18031 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.51■□□□□ 0.55
PTPN1P18031 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN1P18031 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN1P18031 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN1P18031 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN1P18031 MIR7706-201ENST00000613747 67 ntBASIC18.51■□□□□ 0.55
PTPN1P18031 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PTPN1P18031 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.51■□□□□ 0.55
PTPN1P18031 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN1P18031 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN1P18031 AC046185.3-201ENST00000623228 1824 ntBASIC18.51■□□□□ 0.55
PTPN1P18031 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PTPN1P18031 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN1P18031 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN1P18031 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN1P18031 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PTPN1P18031 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN1P18031 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
PTPN1P18031 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.5■□□□□ 0.55
PTPN1P18031 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN1P18031 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.5■□□□□ 0.55
PTPN1P18031 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN1P18031 LAGE3P1-201ENST00000425356 484 ntBASIC18.5■□□□□ 0.55
PTPN1P18031 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.5■□□□□ 0.55
PTPN1P18031 AC139887.3-201ENST00000568585 713 ntBASIC18.5■□□□□ 0.55
PTPN1P18031 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.5■□□□□ 0.55
PTPN1P18031 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
PTPN1P18031 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN1P18031 AL589182.2-201ENST00000619332 1049 ntBASIC18.5■□□□□ 0.55
PTPN1P18031 AC008735.5-201ENST00000623544 497 ntBASIC18.5■□□□□ 0.55
PTPN1P18031 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
PTPN1P18031 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.5■□□□□ 0.55
PTPN1P18031 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.5■□□□□ 0.55
PTPN1P18031 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 LYSMD4-203ENST00000378904 2122 ntBASIC18.5■□□□□ 0.55
PTPN1P18031 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTPN1P18031 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PTPN1P18031 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN1P18031 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN1P18031 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN1P18031 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PTPN1P18031 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.49■□□□□ 0.55
PTPN1P18031 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN1P18031 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.49■□□□□ 0.55
PTPN1P18031 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN1P18031 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN1P18031 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN1P18031 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PTPN1P18031 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN1P18031 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN1P18031 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN1P18031 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms