Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CD28P10747 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.69□□□□□ -0.22
CD28P10747 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.69□□□□□ -0.22
CD28P10747 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.69□□□□□ -0.22
CD28P10747 AC010327.4-202ENST00000591484 748 ntBASIC13.69□□□□□ -0.22
CD28P10747 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.69□□□□□ -0.22
CD28P10747 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
CD28P10747 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CD28P10747 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.69□□□□□ -0.22
CD28P10747 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CD28P10747 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.69□□□□□ -0.22
CD28P10747 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CD28P10747 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.69□□□□□ -0.22
CD28P10747 AC100803.2-201ENST00000562459 1963 ntBASIC13.69□□□□□ -0.22
CD28P10747 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.69□□□□□ -0.22
CD28P10747 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.69□□□□□ -0.22
CD28P10747 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD28P10747 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CD28P10747 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.68□□□□□ -0.22
CD28P10747 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CD28P10747 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.68□□□□□ -0.22
CD28P10747 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.68□□□□□ -0.22
CD28P10747 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.68□□□□□ -0.22
CD28P10747 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD28P10747 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.68□□□□□ -0.22
CD28P10747 KRT18P27-201ENST00000427733 1299 ntBASIC13.68□□□□□ -0.22
CD28P10747 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.68□□□□□ -0.22
CD28P10747 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.68□□□□□ -0.22
CD28P10747 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD28P10747 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 OR6D1P-203ENST00000641209 4860 ntBASIC13.68□□□□□ -0.22
CD28P10747 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD28P10747 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.68□□□□□ -0.22
CD28P10747 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD28P10747 AC007613.1-201ENST00000572811 2597 ntBASIC13.68□□□□□ -0.22
CD28P10747 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.68□□□□□ -0.22
CD28P10747 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CD28P10747 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CD28P10747 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.67□□□□□ -0.22
CD28P10747 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CD28P10747 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CD28P10747 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 AL049757.1-201ENST00000616842 1596 ntBASIC13.67□□□□□ -0.22
CD28P10747 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 AC132938.5-201ENST00000624980 1813 ntBASIC13.67□□□□□ -0.22
CD28P10747 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
CD28P10747 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.67□□□□□ -0.22
CD28P10747 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.67□□□□□ -0.22
CD28P10747 AC073621.1-201ENST00000392730 636 ntBASIC13.67□□□□□ -0.22
CD28P10747 KLF4P1-201ENST00000412782 1185 ntBASIC13.67□□□□□ -0.22
CD28P10747 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.67□□□□□ -0.22
CD28P10747 AC005104.2-201ENST00000427818 678 ntBASIC13.67□□□□□ -0.22
CD28P10747 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.67□□□□□ -0.22
CD28P10747 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.67□□□□□ -0.22
CD28P10747 AC136632.2-201ENST00000512891 861 ntBASIC13.67□□□□□ -0.22
CD28P10747 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.67□□□□□ -0.22
CD28P10747 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.67□□□□□ -0.22
CD28P10747 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.67□□□□□ -0.22
CD28P10747 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.67□□□□□ -0.22
CD28P10747 AL139424.1-201ENST00000607572 797 ntBASIC13.67□□□□□ -0.22
CD28P10747 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.67□□□□□ -0.22
CD28P10747 AC116407.2-201ENST00000613639 860 ntBASIC13.67□□□□□ -0.22
CD28P10747 AL691403.2-201ENST00000618460 490 ntBASIC13.67□□□□□ -0.22
CD28P10747 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.67□□□□□ -0.22
CD28P10747 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms