Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 GATB-205ENST00000508611 605 ntTSL 2 BASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 REXO1L9P-201ENST00000604264 2108 ntBASIC23.05■■□□□ 1.28
CSB-PGBD3P0DP91 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 FALEC-201ENST00000416894 566 ntTSL 3 BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 AC093520.2-201ENST00000561830 333 ntBASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 AC138761.1-201ENST00000584393 385 ntBASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CSB-PGBD3P0DP91 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 AC002056.1-201ENST00000395613 760 ntBASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 AL627223.1-201ENST00000416693 442 ntBASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 AC244107.1-201ENST00000442033 332 ntBASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 SLBP-205ENST00000488267 987 ntTSL 2 BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 AC069262.1-201ENST00000539058 672 ntBASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 AP000997.3-201ENST00000623333 2250 ntBASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CSB-PGBD3P0DP91 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 ADH5P3-201ENST00000433842 1137 ntBASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 AC005237.2-201ENST00000434368 219 ntBASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 AC026120.1-201ENST00000611536 926 ntBASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 WIZP1-201ENST00000531444 2299 ntBASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms