Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC1P07992 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ERCC1P07992 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ERCC1P07992 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ERCC1P07992 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ERCC1P07992 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC1P07992 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.55■□□□□ 0.08
ERCC1P07992 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC1P07992 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.55■□□□□ 0.08
ERCC1P07992 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.55■□□□□ 0.08
ERCC1P07992 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ERCC1P07992 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.55■□□□□ 0.08
ERCC1P07992 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC1P07992 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ERCC1P07992 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.55■□□□□ 0.08
ERCC1P07992 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
ERCC1P07992 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
ERCC1P07992 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
ERCC1P07992 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
ERCC1P07992 AC108860.2-201ENST00000562760 2183 ntBASIC15.55■□□□□ 0.08
ERCC1P07992 AC141586.5-201ENST00000624546 2050 ntBASIC15.55■□□□□ 0.08
ERCC1P07992 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC1P07992 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.55■□□□□ 0.08
ERCC1P07992 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ERCC1P07992 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC1P07992 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC1P07992 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ERCC1P07992 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.54■□□□□ 0.08
ERCC1P07992 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
ERCC1P07992 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 AL355312.1-201ENST00000407115 2176 ntBASIC15.54■□□□□ 0.08
ERCC1P07992 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC1P07992 IGHGP-201ENST00000390555 1178 ntBASIC15.54■□□□□ 0.08
ERCC1P07992 LINC00265-3P-201ENST00000447588 903 ntBASIC15.54■□□□□ 0.08
ERCC1P07992 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.54■□□□□ 0.08
ERCC1P07992 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.54■□□□□ 0.08
ERCC1P07992 Z69720.1-201ENST00000601483 472 ntBASIC15.54■□□□□ 0.08
ERCC1P07992 AL390719.2-201ENST00000606993 987 ntBASIC15.54■□□□□ 0.08
ERCC1P07992 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ERCC1P07992 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ERCC1P07992 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC1P07992 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
ERCC1P07992 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
ERCC1P07992 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ERCC1P07992 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC1P07992 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.53■□□□□ 0.08
ERCC1P07992 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ERCC1P07992 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
ERCC1P07992 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.53■□□□□ 0.08
ERCC1P07992 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms