Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN1P07384 TSPY19P-201ENST00000418461 509 ntBASIC17.26■□□□□ 0.35
CAPN1P07384 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN1P07384 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.26■□□□□ 0.35
CAPN1P07384 TSPY18P-201ENST00000441642 509 ntBASIC17.26■□□□□ 0.35
CAPN1P07384 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CAPN1P07384 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.26■□□□□ 0.35
CAPN1P07384 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN1P07384 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 AC004263.2-201ENST00000617183 678 ntBASIC17.26■□□□□ 0.35
CAPN1P07384 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN1P07384 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN1P07384 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CAPN1P07384 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CAPN1P07384 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPN1P07384 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CAPN1P07384 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN1P07384 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPN1P07384 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN1P07384 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
CAPN1P07384 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPN1P07384 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPN1P07384 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CAPN1P07384 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.25■□□□□ 0.35
CAPN1P07384 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.25■□□□□ 0.35
CAPN1P07384 AC111152.3-201ENST00000569699 673 ntBASIC17.25■□□□□ 0.35
CAPN1P07384 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPN1P07384 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPN1P07384 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.25■□□□□ 0.35
CAPN1P07384 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPN1P07384 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CAPN1P07384 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CAPN1P07384 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN1P07384 AC233702.3-201ENST00000578656 1387 ntBASIC17.25■□□□□ 0.35
CAPN1P07384 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CAPN1P07384 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CAPN1P07384 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CAPN1P07384 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CAPN1P07384 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN1P07384 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN1P07384 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CAPN1P07384 CROCCP2-202ENST00000412962 2773 ntBASIC17.24■□□□□ 0.35
CAPN1P07384 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.24■□□□□ 0.35
CAPN1P07384 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN1P07384 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CAPN1P07384 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN1P07384 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
CAPN1P07384 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.24■□□□□ 0.35
CAPN1P07384 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.24■□□□□ 0.35
CAPN1P07384 DDX43P3-201ENST00000441064 443 ntBASIC17.24■□□□□ 0.35
CAPN1P07384 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
CAPN1P07384 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CAPN1P07384 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CAPN1P07384 AL732292.2-201ENST00000609649 430 ntBASIC17.24■□□□□ 0.35
CAPN1P07384 AL592071.1-201ENST00000611956 408 ntBASIC17.24■□□□□ 0.35
CAPN1P07384 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CAPN1P07384 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.24■□□□□ 0.35
CAPN1P07384 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN1P07384 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 AL353692.3-201ENST00000407031 1396 ntBASIC17.24■□□□□ 0.35
CAPN1P07384 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CAPN1P07384 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms