Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16■□□□□ 0.15
P04436 AL049840.3-201ENST00000602669 611 ntBASIC16■□□□□ 0.15
P04436 MIR7706-201ENST00000613747 67 ntBASIC16■□□□□ 0.15
P04436 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16■□□□□ 0.15
P04436 AC008735.5-201ENST00000623544 497 ntBASIC16■□□□□ 0.15
P04436 LINC01451-201ENST00000623792 534 ntBASIC16■□□□□ 0.15
P04436 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
P04436 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16■□□□□ 0.15
P04436 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
P04436 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
P04436 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04436 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04436 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
P04436 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04436 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16■□□□□ 0.15
P04436 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16■□□□□ 0.15
P04436 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04436 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04436 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04436 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04436 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
P04436 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
P04436 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.99■□□□□ 0.15
P04436 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.99■□□□□ 0.15
P04436 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.99■□□□□ 0.15
P04436 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.99■□□□□ 0.15
P04436 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
P04436 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
P04436 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.99■□□□□ 0.15
P04436 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.99■□□□□ 0.15
P04436 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.99■□□□□ 0.15
P04436 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.99■□□□□ 0.15
P04436 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.99■□□□□ 0.15
P04436 AC105339.3-201ENST00000560043 636 ntBASIC15.99■□□□□ 0.15
P04436 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.99■□□□□ 0.15
P04436 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.99■□□□□ 0.15
P04436 AC006557.2-201ENST00000592985 1240 ntBASIC15.99■□□□□ 0.15
P04436 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
P04436 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
P04436 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
P04436 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 AC009336.1-201ENST00000608941 1553 ntBASIC15.99■□□□□ 0.15
P04436 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
P04436 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.99■□□□□ 0.15
P04436 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04436 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.98■□□□□ 0.15
P04436 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04436 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04436 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
P04436 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04436 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04436 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04436 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04436 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
P04436 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04436 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.98■□□□□ 0.15
P04436 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
P04436 AC092910.1-201ENST00000482027 1129 ntBASIC15.98■□□□□ 0.15
P04436 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.98■□□□□ 0.15
P04436 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.98■□□□□ 0.15
P04436 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.98■□□□□ 0.15
P04436 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.98■□□□□ 0.15
P04436 AL589182.2-201ENST00000619332 1049 ntBASIC15.98■□□□□ 0.15
P04436 MIR1199-201ENST00000621445 119 ntBASIC15.98■□□□□ 0.15
P04436 AC116407.3-201ENST00000623905 1129 ntBASIC15.98■□□□□ 0.15
P04436 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.98■□□□□ 0.15
P04436 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
P04436 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04436 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
P04436 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04436 AC243591.1-201ENST00000452967 1364 ntBASIC15.98■□□□□ 0.15
P04436 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
P04436 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
P04436 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
P04436 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.97■□□□□ 0.15
P04436 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
P04436 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.97■□□□□ 0.15
P04436 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
P04436 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
P04436 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.97■□□□□ 0.15
P04436 NCF1C-201ENST00000438382 1427 ntBASIC15.97■□□□□ 0.15
P04436 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
P04436 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.97■□□□□ 0.15
P04436 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.97■□□□□ 0.15
P04436 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.97■□□□□ 0.15
P04436 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.97■□□□□ 0.15
P04436 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.97■□□□□ 0.15
P04436 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms